Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01198 ATGTCCGATTCGAAGGTGGAAACGATCGCCAGATTAGCCCAATGGAAAATCGACAACTTCGGACCCTGCTCCTACAAAAAATCAGACCCCTTCAAGCTCGGAATTTGGAACTGGTACATGTCCATAGAGAGGAACAGGTACCTCTACATACACATCTTTCCAGAACCTTCTCGGGTTTCTAAGGAACAGCCACCTGTGGCTCGCTTTATCCTACGAGTCTCTAACAACTCTGGCCCTACCCGCAAATTTTACATTTCCCCTGTTCATGAAAGGGTGCTCAGGACATGTGATGACTTTGTCTGGCCTGTTGATACTGCATTCCTTGGTCGCTTCGTTATTGATATTGAATTTCTTGATCTGAAGACCTGCCCAATGAATGGTGGAGAAGCCAGATCTGTATGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAAAGCACTCTTCGATGCCTGTCTCGCATGCTTGATGAGGCTATACATGCTGACCTCACCATTATCACCACAGATGGTACTCTGAGGGCTCATAAGGCAGTTTTATCTGCAAGTTCTACTGTGTTCCATAGCTTGTATCTTCACAATGGTGATGAAAAAGAGACATCTACGATCCATATAGAAGACATGTCTCAAGAATCCTGCACGGCCCTTCTGAGTTACTTGTACGGCACTATAAAGCAAGAAGATTTCTGGAACCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATATGAGATTGGAGATCTCAAAGATGCCTATGAGGAAAGCCTACTGGAAGATCTTAACTCGGGAAATGTTCTGGATAGGCTAAATGACGCTTGGCTTTACCAGTTGCACAAGTTAAAGAAAGGATGTTTCTCATACTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAAATAGATACCTTTTTCCGACATGCAGAGAGGGAGCTAATGCTGGAGATGTTCCAGGAAGTGCTTACAATTTGGAAATAG 978 0.4376 MSDSKVETIARLAQWKIDNFGPCSYKKSDPFKLGIWNWYMSIERNRYLYIHIFPEPSRVSKEQPPVARFILRVSNNSGPTRKFYISPVHERVLRTCDDFVWPVDTAFLGRFVIDIEFLDLKTCPMNGGEARSVWPSDGKLQTVAAQSTLRCLSRMLDEAIHADLTIITTDGTLRAHKAVLSASSTVFHSLYLHNGDEKETSTIHIEDMSQESCTALLSYLYGTIKQEDFWNHRLALLGAANKYEIGDLKDAYEESLLEDLNSGNVLDRLNDAWLYQLHKLKKGCFSYLFDFGKIYDVRDEIDTFFRHAERELMLEMFQEVLTIWK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01198 325 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Pumo9g01198 325 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Pumo9g01198 325 SMART BTB_4 162 260 IPR000210 GO:0005515
Pumo9g01198 325 CDD BTB_POZ_ZBTB_KLHL-like 161 243 - -
Pumo9g01198 325 Gene3D Potassium Channel Kv1.1; Chain A 136 289 IPR011333 -
Pumo9g01198 325 Pfam BTB/POZ domain 155 258 IPR000210 GO:0005515
Pumo9g01198 325 SUPERFAMILY POZ domain 145 258 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01198 Pumo-Chr9 35740754 35746249 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo9g01198 BTB 1.7e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01198 K10523 - gmx:100775687 630.172