Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01191 ATGGAGCTTGTGAATAGCCAAAAGCTAAAACAACAGCAGCAACAGCATTTTCATGTGTTGGTGGTAGATGATAGTGCCATAGATAGAAAGCTTTTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGCTACCTTTGTGGATTCTGGAGACAAGGCTTTGAAATATCTTGGCCTGCTTGATGACGACCTTGATAATTCTTCCTCAACTTCTTCAGAATCATTGCAAGAAAACGGAATCAAAGTGAATATGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTCAAACGAATCAAGGGATCTTCTTGGAAAGATGTACCAGTCGTCATAATGTCATCAGAAAACGTACCATCTAGAATCAGCATGTGCTTAGAAGGAGGGGCAGAGGAGTTTCTATTGAAGCCTCTTCAGCTATCAGATTTAGAAAAGCTTCAGCCATGCTTCCTGAAGCCCTTTGATGATTCTAGTGAACAAGACCAATCTGCTAACAGATCCGTAGCTTCTCACAATGACAATAATAACGATACCATTATGGCATTGTGTCCGGAGCATGGTTTTAAATTACAGTTTGTATCTACAATTGCAACTGCAATATTGCGATTTTGGAAGTCTCTATAG 630 0.4032 MELVNSQKLKQQQQQHFHVLVVDDSAIDRKLLERLLRDSSCKATFVDSGDKALKYLGLLDDDLDNSSSTSSESLQENGIKVNMIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLEKLQPCFLKPFDDSSEQDQSANRSVASHNDNNNDTIMALCPEHGFKLQFVSTIATAILRFWKSL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01191 209 CDD REC_typeA_ARR 19 148 - -
Pumo9g01191 209 Gene3D - 18 193 - -
Pumo9g01191 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 169 IPR045279 GO:0009736
Pumo9g01191 209 Pfam Response regulator receiver domain 19 147 IPR001789 GO:0000160
Pumo9g01191 209 ProSiteProfiles Response regulatory domain profile. 18 153 IPR001789 GO:0000160
Pumo9g01191 209 SMART REC_2 17 149 IPR001789 GO:0000160
Pumo9g01191 209 SUPERFAMILY CheY-like 17 147 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01191 Pumo-Chr9 35635258 35639772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01191 12 154 Response Regulator Gene Family AT2G41310 60.000 1.70e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo9g01191 Response_reg 2.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01191 K14492 - gmx:100790440 322.398