Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01149 ATGCAGCAATGCTTAACTATTAGCACTCTACCTGCAAGAAACATCCCAAGTGCTGATAAGAAAATGCACTTATATCATCATCCGTTGGATTTGGACAGCCAGAGGGTGAGACTTGCATTGGAGGAGGAGGGTGTAGATTATACATCTCACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCCTCTTTCTTCAAGATGAATCACGGGGGAAGGGTCCCGGTTTTCCAAAATGGCTCTCACATCATTTACAATACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGGTTTCCACAGGGGCTGAGAGTATCAGTGCCAGTAGCAGGGAAGTGATTGAATGGATGCAGAAGATACAAGACTGGGACCCCAAGTTTTTCACACTTTCACACATACCCGAGAAATACCGCCTTTATGTTTACAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCCGAGTCCCCCGAATTAGCAGGTGATTACCATAGGAAGTTGAAAGAAGCCTATGATACTGAAGAGAAATTGAAAGAAGCAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGACTGCTTGATGAGGTGGAGAGGCAGCTGAGTGAAACACCTTATTTGGCAGGTCAAGAGTTTACCATGGCTGATGTGATGCTCATTCCAGTATTGGCGCGTTTAAAACTCTTGCATTTAGAGAATGAATACATAACTGGAAGGCCAAACATTGCTGAGTACTGGATTTTGGTTCAGCAAAGGCCTAGTTATAAAAAAGTGATTGGTAAGTACTTCAATGGTTGGAGAAAGCACAAAACACTATTAAAAACATGGTTCTTAGTTCGTATTAGAAGTTTGCTGAAAAGATACTAG 867 0.4175 MQQCLTISTLPARNIPSADKKMHLYHHPLDLDSQRVRLALEEEGVDYTSHHVNPITGKNLDSSFFKMNHGGRVPVFQNGSHIIYNTIDIIQYIERIAVVSTGAESISASSREVIEWMQKIQDWDPKFFTLSHIPEKYRLYVYKFIRQVVIARMSESPELAGDYHRKLKEAYDTEEKLKEADVLRRSKEHLVRLLDEVERQLSETPYLAGQEFTMADVMLIPVLARLKLLHLENEYITGRPNIAEYWILVQQRPSYKKVIGKYFNGWRKHKTLLKTWFLVRIRSLLKRY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01149 288 Pfam Glutathione S-transferase, N-terminal domain 21 95 IPR004045 -
Pumo9g01149 288 CDD GST_C_family 175 246 - -
Pumo9g01149 288 Gene3D Glutaredoxin 16 96 - -
Pumo9g01149 288 Pfam Glutathione S-transferase, C-terminal domain 182 245 - -
Pumo9g01149 288 SUPERFAMILY GST C-terminal domain-like 178 262 IPR036282 -
Pumo9g01149 288 SFLD Main (cytGST) 22 252 - -
Pumo9g01149 288 SFLD Glutathione Transferase (cytosolic) 22 252 IPR040079 -
Pumo9g01149 288 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 22 288 IPR044617 GO:0004364
Pumo9g01149 288 Coils Coil 180 200 - -
Pumo9g01149 288 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Pumo9g01149 288 SUPERFAMILY Thioredoxin-like 18 95 IPR036249 -
Pumo9g01149 288 CDD GST_N_family 22 94 - -
Pumo9g01149 288 Gene3D - 163 259 - -
Pumo9g01149 288 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 138 272 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01149 Pumo-Chr9 33460732 33463467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01149 22 288 Glutathione S-transferase Gene Family AT1G77290 68.914 3.19e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01149 K22077 - gmx:100808461 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01149 9 33460732 33463467 Pumo9g01149 9 33460732 33463467 ECH
Pumo9g01149 9 33460732 33463467 Pumo10g01292 10 16944871 16947559 PCT