Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01141 ATGGCTCCTGAATACTTCATGTATGGTAAAGTAAATGACAAGATTGATGCCTATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGGAAGGTGTTACAATTGTTAGATCCCAGTTTGGGTGATAACTATAATCATGAAGAGATGGAAAGGATGGTCTTGGCAGCTACACTTTGTATCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCTTATCTCTAAGCTCCTTGGAGGTGATGCTGATGTGAATCAAGTGGGCAAGACTAGAAGTTAA 354 0.4266 MAPEYFMYGKVNDKIDAYAFGVVLLELLSGRKPISGDYPKGQESLVMWASPILNSGKVLQLLDPSLGDNYNHEEMERMVLAATLCIRRAPRARPQMSLISKLLGGDADVNQVGKTRS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01141 117 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01141 117 SUPERFAMILY Protein kinase-like (PK-like) 1 101 IPR011009 -
Pumo9g01141 117 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Pumo9g01141 117 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Pumo9g01141 117 PANTHER OS08G0249100 PROTEIN 1 112 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01141 Pumo-Chr9 33355774 33356639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01141 1 103 Trihelix Transcription Factor Family AT5G38560 46.729 1.11e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pumo9g01141 PK_Tyr_Ser-Thr 1.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01141 - - gmx:100305405 214.927