Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01133 ATGGATCCTTCCAGGAGGACACTTCAGAGGATTTCAGACGATGAATCCCTGTCCTCTGCATCTACCTGTTCAGGTTTGGCTTCCAAAAGAGCTTACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTCCGAATTGGCAATGGTAACCAGCTTATCAGAGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGATTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGGTTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCACGATCCCTCAAAAATCGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACACATAAGGTTTTGTTATATATGGGGTCCAACAAATTGAATATGGTCTACTGCATTTACTGA 453 0.4084 MDPSRRTLQRISDDESLSSASTCSGLASKRAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVLLYMGSNKLNMVYCIY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01133 150 Gene3D - 76 138 - -
Pumo9g01133 150 SMART c3hfinal6 81 109 IPR000571 GO:0046872
Pumo9g01133 150 SMART c3hfinal6 110 134 IPR000571 GO:0046872
Pumo9g01133 150 ProSiteProfiles Zinc finger C3H1-type profile. 81 110 IPR000571 GO:0046872
Pumo9g01133 150 PANTHER CCCH ZINGC FINGER 9 135 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pumo9g01133 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01133 - - gmx:100802468 279.641