Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01132 ATGCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCTCAAACAGAAATTGTCCATATAGACATGTCAATGTGAACCCCAAGGCATCTATTTGTGAAGGATTTCTCAAGGGTTATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACCGGAACCTGTACTCAAGGAACCAAATGCAAACTTCATCACCCCAAAAAGCAAAGCAAGGGAAAGAAAAGGAAGAGAACTGCAGAGCAGAAGAACAGTAGAGGGCGTTATTTTGGTTCTATTCCTGCTGATGTTTCGGAATCTGGGATGATGGTGGCTGCTCCAAAGCGACATAGACAGAGTGGTGAACTTGAAGAGGAACTTTCTGACTACATCAGCCTTGATGCTGTGAATGAAGAAGCTGCAGACACCGTCGATCAATCATTTGAGCCAGCTGCATTCTGTGACAATGATTCCTTGGATTTACAGTTGGATGATTTTGATGAACTTATTAAACCAGTTCTTCTATTGAATACAAAGTTCACATTGCAATCACCTCAGTCTAGTAGCCTCCAAGCTTAG 597 0.4221 MQVIPERMPDCSYFLQGLCSNRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCPTFEATGTCTQGTKCKLHHPKKQSKGKKRKRTAEQKNSRGRYFGSIPADVSESGMMVAAPKRHRQSGELEEELSDYISLDAVNEEAADTVDQSFEPAAFCDNDSLDLQLDDFDELIKPVLLLNTKFTLQSPQSSSLQA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01132 198 MobiDBLite consensus disorder prediction 79 95 - -
Pumo9g01132 198 ProSiteProfiles Zinc finger C3H1-type profile. 5 31 IPR000571 GO:0046872
Pumo9g01132 198 ProSiteProfiles Zinc finger C3H1-type profile. 32 59 IPR000571 GO:0046872
Pumo9g01132 198 MobiDBLite consensus disorder prediction 79 104 - -
Pumo9g01132 198 SUPERFAMILY CCCH zinc finger 58 79 IPR036855 GO:0046872
Pumo9g01132 198 Gene3D - 33 97 - -
Pumo9g01132 198 Gene3D - 2 32 - -
Pumo9g01132 198 SMART c3hfinal6 59 81 IPR000571 GO:0046872
Pumo9g01132 198 SMART c3hfinal6 5 30 IPR000571 GO:0046872
Pumo9g01132 198 SMART c3hfinal6 32 58 IPR000571 GO:0046872
Pumo9g01132 198 PANTHER CCCH ZINGC FINGER 2 184 - -
Pumo9g01132 198 FunFam Zinc finger CCCH domain-containing protein 7 33 94 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pumo9g01132 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01132 - - gmx:100788859 362.844