Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01127 ATGTCTACAGCTGGTCAGGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAAGCAGGGAAGCCACTATCGATAGAAACGATAGAAGTAGCACCACCCCAGAAAGGTGAAGTGCGTTTGAAGATCCTCTTCAACTCCCTTTGTCGTACTGATGTTTATTGGTGGGATGCTAAGGGCCAGAATCCGCTGTTTCCTCGTATCTTAGGTCACGAAGCTTCAGGGATTGTGGAGAGCGTGGGAGAGGGTGTGACCCATCTGAAGCCAGGCGACCATGCACTCCCAATATTCACTGGAGAGTGTGGGGAGTGCAAACATTGCAAGTCTGAAGAGAGCAACCTCTGTGATGTTCTCAGGATCAACACTGACAGGGGAGTCATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGCCAACCCATTTACCACTTCGTTGGAACCTCCACTTTCAGTGAATACACTGTTCTCCATGCCGGATGTGTCGCCAAGATCAACCCTGCTGCCCCTCTTGACAAAGTCTGTGTTGTCAGTTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCAAAGCCTAATAATACTGTTGCTGTCTTTGGATTGGGAGCTGTTGGTCTTGCTGCCTGTGAAGGGGCAAGGGTTTCTGGTGCATCTAGAATCATTGGGGTTGATTTACTTCCCAATCGATTTGAACAAGCCAAAAAATTTGGGGTCACTGAATTTGTGAACCCGAAAGATCACAACAAACCAGTTCAAGAGGTCATTGCTGAAATGACTGATGGAGGAGTAGATCGTGCTATTGAATGCACTGGAAGCATCCAAGCTTCGATCTCAGCATTTGAATGCACTCATGATGGTTGGGGTGTTGCTGTACTTGTTGGTGTGCCAAAGAAGGATGTTGAATTCAAAACTCATCCTATGAAGTTCATGGAAGGGAGAACTCTTAAGGGTACCTTCTATGGCCACTACAGACCCCGCACCGATATTCCTGGTGTTGTGGAGAAGTACCTCAACAAGGTGATCACAAAGCTAGATCTTATATACATCATTAAGCATGGACGGATCCAGAAACCTATTAAAGGGGGATCTGGATTTTTTTTTCTTCCTTTATAA 1119 0.462 MSTAGQVIKCRAAVAWEAGKPLSIETIEVAPPQKGEVRLKILFNSLCRTDVYWWDAKGQNPLFPRILGHEASGIVESVGEGVTHLKPGDHALPIFTGECGECKHCKSEESNLCDVLRINTDRGVMLSDGKTRFSKNGQPIYHFVGTSTFSEYTVLHAGCVAKINPAAPLDKVCVVSCGFCTGFGATVNVAKPKPNNTVAVFGLGAVGLAACEGARVSGASRIIGVDLLPNRFEQAKKFGVTEFVNPKDHNKPVQEVIAEMTDGGVDRAIECTGSIQASISAFECTHDGWGVAVLVGVPKKDVEFKTHPMKFMEGRTLKGTFYGHYRPRTDIPGVVEKYLNKVITKLDLIYIIKHGRIQKPIKGGSGFFFLPL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01127 372 FunFam Alcohol dehydrogenase class-P 182 320 - -
Pumo9g01127 372 Gene3D - 182 320 - -
Pumo9g01127 372 PANTHER ALCOHOL DEHYDROGENASE 5 344 - -
Pumo9g01127 372 FunFam alcohol dehydrogenase 1-like isoform X1 18 181 - -
Pumo9g01127 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Pumo9g01127 372 Pfam Zinc-binding dehydrogenase 205 329 IPR013149 -
Pumo9g01127 372 SUPERFAMILY GroES-like 3 186 IPR011032 -
Pumo9g01127 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 340 IPR036291 -
Pumo9g01127 372 CDD alcohol_DH_plants 8 354 - -
Pumo9g01127 372 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Pumo9g01127 372 Gene3D - 18 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01127 Pumo-Chr9 33221303 33226408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01127 14 323 Monolignol Biosynthesis Gene Families AT1G72680 26.032 2.34e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01127 K18857 - gmx:100775490 671.774