Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01111 ATGATTAATTTTCCTATTTTGAATGCAGGTGCAGCAGCAGGATTTGTTATTCTATTCGTAGGGATTGCCATACCATACTTAATATACCAAAAGAAGAAGCTAATCAAATTAAAAGAGAAATTCTTTCAGCAGAATGGTGGTTTGATTTTGTTACAGAAACTCTCTACAACAGAAAAGTCCTCCCGCTTTATGCAAATTTTCACACAAGAAGAACTGAAGAAGGCCACCCACAACTTTGATGAGAGTTCAATCATTGGCAAAGGAGGTTTTGGTACAGTTTTCAAAGGACTTCTAGCAGATAACAGAACTGTAGCTATCAAGAAGTCCAAAATAGTTGATGAGAGCCAAAAGGAACAATTCATTAACGAGGTGATTGTTCTATCCCAAATCAATCATAGGAATGTGGTCAGACTCTTGGGATGCTGTTTAGAGACAAAAGTTCCTTTACTAGTTTATGAATTTGTTAACAATGGTACCCTTTTTGATTTTATACACGCCGAAAGAAAGGTAAATGAAGAAACTTGGAAAACCCGTGTAAGGATAGCAGCAGAGGCAGCTGGAGCTCTATCATATCTGCACTCAGAAGCCTCAGTAGCGATTATCCACAGAGATGTCAAGACTGCTAACATCCTCTTGGATGACACTTACACTGCTAAAGTGTCTGACTTTGGAGCTTCAAGGTTGGTTCCACTTGATCAAACTGAAATAGCCACAATGGTGCAAGGAACTTTTGGTTACCTGGATCCGGAGTACATGCTTACAAGCCAACTGACGGAGAAAAGTGATGTCTATAGCTTTGGCGTAGTGCTTGTAGAGCTACTAACAGGGGAGAAACCTCTTTCTTTGAGCAGGCCAGAAGAGGAAAGAAGTCTTGCTAACCACTTTCTATCATGCTTGAAAGAGGATCGTCTGATTGATATTCTTCAATTTGGCCTTCAGAATGAAGAAAATAAAAAGGAGATCATGCAAGTTACTATTCTTGCTGCAAACTGCTTAAGACTCGATGGGGAGGAAAGACCTAGCATGAAGGAAGTGGCAATGGAGTTGGAGGCCATAAGGCAAACGGAGAAACACCCTTGGATCAATAGAGAGAAAAGTTTGGAGGAGACCCAATACTTGCTTCCTGAGGCACCATCCAAGATTTATGAACGTGGTGATAGCAGCAGTCTTCAATATACTGTCTATGACAGCATCAGGGATCGTGTACTAATTGCCTTGGATAACGGAAGATGA 1233 0.4063 MINFPILNAGAAAGFVILFVGIAIPYLIYQKKKLIKLKEKFFQQNGGLILLQKLSTTEKSSRFMQIFTQEELKKATHNFDESSIIGKGGFGTVFKGLLADNRTVAIKKSKIVDESQKEQFINEVIVLSQINHRNVVRLLGCCLETKVPLLVYEFVNNGTLFDFIHAERKVNEETWKTRVRIAAEAAGALSYLHSEASVAIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPLSLSRPEEERSLANHFLSCLKEDRLIDILQFGLQNEENKKEIMQVTILAANCLRLDGEERPSMKEVAMELEAIRQTEKHPWINREKSLEETQYLLPEAPSKIYERGDSSSLQYTVYDSIRDRVLIALDNGR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01111 410 ProSiteProfiles Protein kinase domain profile. 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01111 410 FunFam Wall-associated receptor kinase 2 155 372 - -
Pumo9g01111 410 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 356 IPR045274 GO:0007166
Pumo9g01111 410 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Pumo9g01111 410 SMART serkin_6 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01111 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pumo9g01111 410 Gene3D Phosphorylase Kinase; domain 1 51 154 - -
Pumo9g01111 410 Pfam Protein kinase domain 80 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01111 410 SUPERFAMILY Protein kinase-like (PK-like) 57 350 IPR011009 -
Pumo9g01111 410 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Pumo9g01111 410 FunFam Wall-associated receptor kinase 2 49 154 - -
Pumo9g01111 410 CDD STKc_IRAK 85 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01111 Pumo-Chr9 31832952 32006498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01111 10 410 Receptor kinase-like Gene Family AT1G21230 53.731 3.01e-144 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pumo9g01111 Pkinase 1.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01111 - - gmx:100778914 674.085