Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01104 ATGAGCGTGGAAATTAATCCTCTCCCGTCTTACATCGTGGTTGCATGTGATGCCACGAGAGATCGCAATGAGCATGAGATCAAGGTTGTGGTTGATCACCTTCGAAAAAGGGGTGACATTCTCTCTGCAAGTGATGGCTTGCTTGTGTTCTGTGCCTTGCACAAGGTTCCTCACCCAATGGGGTACCAGACATTAGCATGCCCGGAGTCCTTTGCTGGCACCAATATTCGTGCAATGGAGGAAGAAGTTAAAAGAAAGGTTGCAGCATATAAAAGTGTGCTTCTGCCGAGTTATGAAGAACGAGAAAATAAAGGGGTTAGAATCGAGGTTAAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTTTACAAGAGGTTACAAACTATAATGCATCTTGGGTTATCCTTGATAGGCATCTTCGGCGTGACCTGAGATTCTACAGGAACAAGATATCATGTAAAATTGGGTTGGTTAAAGATGACTTGTCGGTGGATATTTGGAGACCTCATCATATAAATGAAACAGATGTGACAGAACAAAAGCTTATCTATTCTTTGTCCAAGTGTGTTTCACTATCAGATTCTCATAGTGTTGGAGACGAGGAGCAATCTGTTATCTTTTGCAAAAGCTATCCTCTTTCCATTGCTTCTGAAAGCTCTAATATGTCTAAGAGCAGTATGAAACATTCAAATGCTAACAAGTTAGGGGAGCATAATTCTTCAATAGATTTTGGATCTTCTTCAGGCATAAGCATTAAAGGAGAATATAAGCATCCCATTAATTCTCAAATTTCCCAAACGCAAAACAAATATGGCTTTCTACCAAATTCTTCAGATGCTACAATTCTTTGTGCCGGCTGTGGGACACAGACTGCATTATATACCAATGAGTTAAAGAGGTTCAGCTATTCTGAGATACAAATTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCACGTTTACAAGGGCATGCTTAAAGATGGGCAACAAATAGCTGCTAAAGTAAGGAAAGAAGAAAGTAGACAAGGGTTTTCTGAATTCAATTCTGAGGTTTACGTGTTGAATTTTGCTCGGCACAAGAATATAGTGATGCTTTTGGGTTACTGTTTTAAAGAAAGGTTAAACATTTTGGTATATGAGTATATTTGCAACAAGTCTCTTGATTGGCATTTATTTGATAAAAATGCGGCAGTTCTTGAGTGGCACCAAAGATATGCCATTGCCATTGGAACTGCAAAAGGATTACGTTTTCTACATGAGGAATGTCGTGGAGGTCCTATCATTCATCGTGACATGAGACCAAGCAATATACTCCTCACTCATGATTTTGTTCCCATGGTAGGTGACTTTGGCCTTGCCAAATGGAAGACTAGTGATAATACTCTACACACAAGGATAATGGGCACATTAGGATACCTTGCCCCCGAGTATGCTGAAGATGGTATTGTTTCTGTGAGAGTAGATGTGTATGCTTATGGCATTATTTTGTTACAATTGATAACAGGACGCAAGGCAACTTCTAGTCCAGAGCAACATCTCTCCCTTCGACAATGGGCTGAGCCCAAGATTGAGAAGTTGGCATTTGATGAACTTATAGATTCTCGTCTAGGGGATTCATATAACTCAAATGAGCTATATACCATGGCCAAGGTAGCATACTACTGTGTGCAAAGAGATCATGAGAAGCGCCCGTCTATTGGAGAGGTTGTGCGCCTTCTTGAGGGACAAAATGACCTTTTCTGTTCCATTAATGCAGACCAATTCGTATCAAAATAG 1797 0.4012 MSVEINPLPSYIVVACDATRDRNEHEIKVVVDHLRKRGDILSASDGLLVFCALHKVPHPMGYQTLACPESFAGTNIRAMEEEVKRKVAAYKSVLLPSYEERENKGVRIEVKVTAGFPIRQVILQEVTNYNASWVILDRHLRRDLRFYRNKISCKIGLVKDDLSVDIWRPHHINETDVTEQKLIYSLSKCVSLSDSHSVGDEEQSVIFCKSYPLSIASESSNMSKSSMKHSNANKLGEHNSSIDFGSSSGISIKGEYKHPINSQISQTQNKYGFLPNSSDATILCAGCGTQTALYTNELKRFSYSEIQIATNDFSKDNLLGEGGYGHVYKGMLKDGQQIAAKVRKEESRQGFSEFNSEVYVLNFARHKNIVMLLGYCFKERLNILVYEYICNKSLDWHLFDKNAAVLEWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMVGDFGLAKWKTSDNTLHTRIMGTLGYLAPEYAEDGIVSVRVDVYAYGIILLQLITGRKATSSPEQHLSLRQWAEPKIEKLAFDELIDSRLGDSYNSNELYTMAKVAYYCVQRDHEKRPSIGEVVRLLEGQNDLFCSINADQFVSK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01104 598 Gene3D Phosphorylase Kinase; domain 1 286 388 - -
Pumo9g01104 598 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 285 388 - -
Pumo9g01104 598 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 389 594 - -
Pumo9g01104 598 Pfam Protein kinase domain 314 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01104 598 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 278 584 - -
Pumo9g01104 598 CDD STKc_IRAK 319 582 - -
Pumo9g01104 598 ProSiteProfiles Protein kinase domain profile. 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01104 598 SUPERFAMILY Protein kinase-like (PK-like) 294 583 IPR011009 -
Pumo9g01104 598 ProSitePatterns Tyrosine protein kinases specific active-site signature. 434 446 IPR008266 GO:0004672|GO:0006468
Pumo9g01104 598 Gene3D Transferase(Phosphotransferase) domain 1 390 592 - -
Pumo9g01104 598 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01104 Pumo-Chr9 31371219 31379349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01104 289 581 Trihelix Transcription Factor Family AT5G38560 44.371 1.51e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pumo9g01104 Pkinase 5.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01104 - - vun:114163670 843.188