Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01096 ATGTCATTGGTTATATCTACAGAGTTGGCTGATACATCATATAGGAATGCCAAGATCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCTCACAATTTTGCACCAGATAAGCAAAGAAACATGTATATGACAACAGAATCATACTCCAGTGAGAGTTATGAAAAGTACTTCCGCGATTCACCAACAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGCAAATTCAGTTCACCCTGATGGTGCTTCTTCTTACCTGCTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACACTTCTATCTTGTCTACAAGGCATCGCGATGCCTATCGGTCCAATTTTGGATCAGATTTCGTGGAAAATGGGAGCCCGGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAGCTTCAAGAATTGGAGAGGGCTTTGCTTTCTGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTTCAAAGCATGGAGATTGATCCTGACATGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTGCTCCATGACTCGCCAAAGGAGTCCTCATCCTCAGATTCTTCCAATCTCAGCAGCATCAGTAGCACCACCAAAGACACATCACAAAACTCGCCCCAGACACCGAAGGAACTGCTTTATGATTGTGCTAGAGTACTTTCAGAAGGAAATGAAGAGGAAGCCACGTCTATGATAAACAAGCTCCGGCAAATGGTCTCAATTCAGGGTGATCCTTCTCAAAGAATTGCAGCTTACATGGTGGAAGGACTTGCAGCTCGTCTCGCTTCATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAGGAACCTCCTTCCAACGATCGCTTAGCAGCAATGCAGATACTATTTGAGGTCTGCCCGTGTTTTAAATTTGGATTCATCGCTGCAAATGGCACGATAGCTGAGGCCGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAATACATAACTCTAATACAAACACTTGCTTCAATGCCAGGTAGGCCACCTCATGTGAGATTAACCGGGGTGGATGATCCTGAGTCTGTGCAGCGTTCCGTCGGTGGCATAAGCATCATAGGACAAAGACTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTCGAGTTTCGAGCAGTGGCATCGAGCACCTCAATTGTCACGCCATCAATGCTCAACTGTCGTCCCGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGCGATGAAACTGTATCGACGGTGAACGAGAGAGACCAACTTCTTCGCATGGTTAAGAGCTTGAATCCAAAGCTTGTGACAGTTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCCAAGATTTGTTGAAGCCTACAATTACTACTCTGCTGTGTTTGACACACTTGATGCAACTCTCCCTAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCCTGGCAAAGGACATTGTCAACATCATTGCGTGCGAGGGCGAGGATAGAATAGAACGGTACGAAGTGGCCGGAAAATGGAGGGCGAGGTTGTCAATGGCTGGCTTCACTCCATCCCCAATTAGCACAAATGTGAGAGAAGCAATTAGGAAACTCATTATTAAACAATACTGTGAGAGGTTCAAGACAAAGGAGGAAATGGGGGGTCTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1779 0.4542 MSLVISTELADTSYRNAKIYTLKGTDVTPDLSSHNFAPDKQRNMYMTTESYSSESYEKYFRDSPTEELIEPSSSSISANSVHPDGASSYLLRASSGASVIVNNPFDTSILSTRHRDAYRSNFGSDFVENGSPDGLDFDGEMRLKLQELERALLSDEEEEEEDIFETVQSMEIDPDMAEWANPLQDMLLHDSPKESSSSDSSNLSSISSTTKDTSQNSPQTPKELLYDCARVLSEGNEEEATSMINKLRQMVSIQGDPSQRIAAYMVEGLAARLASSGKCIYQALRCKEPPSNDRLAAMQILFEVCPCFKFGFIAANGTIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPPHVRLTGVDDPESVQRSVGGISIIGQRLEKLAEELGLPFEFRAVASSTSIVTPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLPRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIIACEGEDRIERYEVAGKWRARLSMAGFTPSPISTNVREAIRKLIIKQYCERFKTKEEMGGLHFGWEDKNLIVASAWK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01096 592 ProSiteProfiles GRAS family profile. 212 592 IPR005202 -
Pumo9g01096 592 MobiDBLite consensus disorder prediction 188 221 - -
Pumo9g01096 592 Pfam GRAS domain family 223 592 IPR005202 -
Pumo9g01096 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 201 587 IPR005202 -
Pumo9g01096 592 MobiDBLite consensus disorder prediction 190 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01096 Pumo-Chr9 30366390 30370792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01096 1 592 GRAS Transcription Factor Family AT1G21450 60.768 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo9g01096 GRAS 1.3e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01096 - - gmx:100807048 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01096 9 30366390 30370792 Pumo9g01096 9 30366390 30370792 ECH
Pumo9g01096 9 30366390 30370792 Pumo10g01331 10 17663160 17667349 PCT