Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01093 ATGCCTCCTTGGTGGACAAGAAGGTGTCAAATAGTTGCACAAGAAGATGGCTATAAGCAACAACAAAATTGCAGGAACATTGAAAGTGAAAAAAGCAATGCATCTAATAAGAGGAAGCAGCAAAACATAGAGAAGGCAAAAAGCTTTGAAGAAACTGTCCTAGTCTCTCACCAATTTTCTAGAACTTCCATTCCTAATAGACCCTCTTTCTATGAAATCTTACATTCGGAGAGGCAAGTATATCCACTACCTCAGCCATCAAGGTCACTGGAACTTGCATCAGTGAAGTTTGCTTCAGAACCAGCATTAAGTTCAAGCTCTCCTTCATCAAGGTCTTCTAATTCAGCTTCTTTGGGTGAAGATTCCAGTGGATTTCATAGAGATTTTGGTTCTTTCATGTTGGAGGTAGCAATACTAAGTCAGCTTTCCCATCGCAACATTGTCCAATATTATGGAAGCGAACTGGGGAAAGGGAAGCTGTCCCTATATTTAGAGTATGTCTCTGGTGGATCAATTCACAAATTGCTTCAGGAATATGGCCCTTTCAAGGAATCTCTCATTAAAAGTTACACCAGGCAGATTCTTCATGCTCTAGCTTACTTGCATGCAAGAAATACTGTGCACAGGGATATCAAATGCTCAAACATACTAGTAGATCCTAATGGTGTAATCAAGGTTGCTGATTTTGGCATGGCAAAACAAGTAACATCAAGTACTATTGTTCATTCTTTCCAAGGAACCCCTCATTGGATGGCACCTGAGGTGATTCTGAATACAAGTTGTGTTGGCCTTGCTGTTGATATATGGAGCTTGGGGTGTACAATTATTGAAATGGCAACAACAAAGCCTCCTTGGAGCAAGTATAAAGGGGTTGCTGCAATGTTCAAAATTGCAAACAGCAATGATTACCCGCAAATTCCTTCTCATCTTTCAGAGGATGCACAAAAATTTTTGAGACTTTGCTTTCAAAGAGACCCTCTTTTACGTCCTTCGGCTGCCCAACTGCTACAACACCCTTTTAGTTTTATTCAAGAAGATAGTTAA 1044 0.4013 MPPWWTRRCQIVAQEDGYKQQQNCRNIESEKSNASNKRKQQNIEKAKSFEETVLVSHQFSRTSIPNRPSFYEILHSERQVYPLPQPSRSLELASVKFASEPALSSSSPSSRSSNSASLGEDSSGFHRDFGSFMLEVAILSQLSHRNIVQYYGSELGKGKLSLYLEYVSGGSIHKLLQEYGPFKESLIKSYTRQILHALAYLHARNTVHRDIKCSNILVDPNGVIKVADFGMAKQVTSSTIVHSFQGTPHWMAPEVILNTSCVGLAVDIWSLGCTIIEMATTKPPWSKYKGVAAMFKIANSNDYPQIPSHLSEDAQKFLRLCFQRDPLLRPSAAQLLQHPFSFIQEDS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01093 347 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 134 340 - -
Pumo9g01093 347 SUPERFAMILY Protein kinase-like (PK-like) 129 340 IPR011009 -
Pumo9g01093 347 PRINTS Tyrosine kinase catalytic domain signature 246 256 IPR001245 GO:0004672|GO:0006468
Pumo9g01093 347 PRINTS Tyrosine kinase catalytic domain signature 200 218 IPR001245 GO:0004672|GO:0006468
Pumo9g01093 347 PRINTS Tyrosine kinase catalytic domain signature 310 332 IPR001245 GO:0004672|GO:0006468
Pumo9g01093 347 PRINTS Tyrosine kinase catalytic domain signature 164 177 IPR001245 GO:0004672|GO:0006468
Pumo9g01093 347 Pfam Protein kinase domain 131 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01093 347 Gene3D Transferase(Phosphotransferase) domain 1 117 346 - -
Pumo9g01093 347 ProSiteProfiles Protein kinase domain profile. 59 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01093 347 MobiDBLite consensus disorder prediction 20 43 - -
Pumo9g01093 347 Coils Coil 24 44 - -
Pumo9g01093 347 SMART serkin_6 71 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01093 Pumo-Chr9 30324473 30330410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01093 135 340 MAP Kinase Kinase Kinase AT1G53570 67.476 6.40e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo9g01093 Pkinase 2.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01093 K04421 - ini:109172719 317.39