Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01090 ATGGTGCCTCCTGGGCCACCCACGCCGATTGGTGGCGCCCAGTCTGTGCCGCCGTCCCTTTTGAGATCGAATTCGGGAATGTTGGGGGGTCAGGGGGGGCCCGTGCCTTCACAAACTTCGTTTCCTTCGCTGATTGCGCAGCGAAACCAGTTTAATAACATGAACATGCTAGGGAATATGTCTAATGTGACTTCCTTGCTGAACCAGTCTTTCCCGAATGGAATTCCGAATTCCGGGCTTGCTGGCCCAGGGAGCAGCCAGCGCAGTGGAGGCGTTGATGCTGGGGCAGAGGCGGATCCGCTATCTGGTGTTGGCAGTGGAATGAATTTTGGCAATCAGTTGCAATCAAATTTGATGAACCCTGGCTCATCTAGTCAAGGTCAGGGTCAACAGTTTTCAAATGCTTCTGGTAGCCAGATGTTGCCAGATCAACAGCATTCCCATCAACTTGAACCTCGGAATTTCCAACAACATAGTCAGCCGTCAATGCAACAGTTCTCTGCTCCTCTGAATGCTCAACAGCAACAGCAGCATTTTCAGTCAATTCGAGGAGGGATGGGTGGTGTTGGACCAGTGAAGTTGGAGCCGCAGGTAAGCAATGATCAGTTTGGGCAGCAACAGCAGTTGCCGTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCGCAACAACTTCAAACATTGAGAAATATGGCACCAGTGAAAATGGAGCCCCAGCATACTGATCAGCAGTTTTTGCATCAGCAGCAACAGCAACAACAGCAGCAGCATCAGCAACAACAACAGCAACAACTGCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCAACTTTTGCATCAGCAGAGACTTTTGCAATATCAACAACATCAGCAGCAGCAGCAACTGTTGAAGGCAATGCCTCAACAACGGTCCCAGCTACCACAGCAGTTTCAACAGCAAAATATGCCTATGAGGTCTCCTGTGAAACCAGCATATGAACCCGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAATATCGAATTCTGGAGGAAATTTGTTGCCGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGTCTGCTGCAAGAGAAAACCTTATAAACTATTTCTGATGCCTGGATAA 1221 0.4873 MVPPGPPTPIGGAQSVPPSLLRSNSGMLGGQGGPVPSQTSFPSLIAQRNQFNNMNMLGNMSNVTSLLNQSFPNGIPNSGLAGPGSSQRSGGVDAGAEADPLSGVGSGMNFGNQLQSNLMNPGSSSQGQGQQFSNASGSQMLPDQQHSHQLEPRNFQQHSQPSMQQFSAPLNAQQQQQHFQSIRGGMGGVGPVKLEPQVSNDQFGQQQQLPSRNLAQVKLEPQQLQTLRNMAPVKMEPQHTDQQFLHQQQQQQQQQHQQQQQQQLLHMSRQSSQAAAAQMNQLLHQQRLLQYQQHQQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQVCCKRKPYKLFLMPG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01090 406 MobiDBLite consensus disorder prediction 240 272 - -
Pumo9g01090 406 Pfam LIM-domain binding protein 338 378 IPR029005 -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 300 323 - -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 106 182 - -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 236 272 - -
Pumo9g01090 406 PANTHER LIM DOMAIN-BINDING PROTEIN 225 402 IPR029005 -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 300 324 - -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 74 196 - -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 1 41 - -
Pumo9g01090 406 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01090 Pumo-Chr9 30065061 30066375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01090 1 402 C2H2 Transcription Factor Family AT1G43850 55.609 6.56e-94 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01090 - - gmx:100798031 607.831