Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01089 ATGCCCCGTGAATATCATAATTCCTCTGGCCAGATTGTCCTAGATTACGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAACTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCATTTACTCAAAATTCAACACCCAATTTATCCGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTTAATAGTATGAAGGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCCATGGATAGCTTAGCTAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCACAACAGCCACCCCAGCATATGGTGCCCCATACTTCAAATGGTGATCAAAACTCTGTGCAAACTGCTGCTATGCAAATTGCTTCTAGCAATGGTGTGACAAGTGTAAATAATTCCGTCAATGCAGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAAATCTATGAATTCTCGACAAAATTCAATGAACAATGCGAGCAGCCCTTATGGAGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCCTCTGGTAATGTGCCACAAGCACAACCAAATGCATCCCCTTTTCAATCACCGACACCATCCTCATCTAACAACCCACAAACATCTCACCCTGCCTTAACTTCTGCAAACCACATGGGTACAGCAAACTCACCAGCTAATATTCCCTTGCAACAACAGCAGACATCTCTTCCTGCTGAAGCTGACCCTAGCGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGTCCTCCCAGATGAATGGCCCAGGTGGAATGGCTGGTGCTGGTTCGCTTGGAAACGACATGAAGAATGTAAACGGGATTCTACCAGGGAGTAACAATACAGGGCTCAACAGTGGCAGTGGCCTGGTGGGTAATGGGGCCGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTATGACCAATGGAATGAGACCTGTAATGGGACATAATTCAATCATGAATGGAAGGGGTGGAATGGCATCTCTTGCTCGCGAACAAGTTATGAACCATCAACAGGATTTGTCAAGCCAAATACTTAGTGGGCTAGGATCAGTAAATGGCTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 1440 0.4437 MPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNSTPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQAQQSEDQLQQQSQPQQPPQHMVPHTSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASTTTSTIVGLLHQKSMNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHPALTSANHMGTANSPANIPLQQQQTSLPAEADPSDAQSSVQKIIHEMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGSNNTGLNSGSGLVGNGAVNSNSGVGVGGYGTMGLGPSGMTNGMRPVMGHNSIMNGRGGMASLAREQVMNHQQDLSSQILSGLGSVNGFNNLQFDWKPSP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01089 479 MobiDBLite consensus disorder prediction 250 319 - -
Pumo9g01089 479 MobiDBLite consensus disorder prediction 162 205 - -
Pumo9g01089 479 Pfam LIM-domain binding protein 2 158 IPR029005 -
Pumo9g01089 479 MobiDBLite consensus disorder prediction 148 205 - -
Pumo9g01089 479 PANTHER LIM DOMAIN-BINDING PROTEIN 1 468 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01089 Pumo-Chr9 30057186 30064551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01089 1 475 C2H2 Transcription Factor Family AT1G43850 58.052 3.01e-120 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01089 - - gmx:100798031 755.747