Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01087 ATGTCTCCTTGGTGGACAAGAAGGTGTCAAATAGTTGCACAAGAAGATGGCTATAAGCAACAACAAAATTGCAGGAACATTGAAAGTGAAAAAAGCAATGCATCTAATAAGAGGAAGCAGCAAAACATAGAGAAGGCAAAAAGCTTTGAAGAAACTGTCCTAGTCTCTCACCAATTTTCTAGAACTTCCACTCCTAATAGACCCTCTTTCTATGAAATCTTACATTCGGAGAGGCAAATATATCCACTACCTCAGCCATCAAGGTCACTGGAACTTGCATCAGTGAAGTTTGCTTCAGAACCAGCATTAAGTTCAAGCTCTCCTTCATCAAGGTCTTCAGCTTCTTTGGGTGAAGATTCCAGTGGATTCCATAGAGATTTTGGTTCTTTCATAGAATTTGCAGAATATGAATGTGACTCTGGCTTGACAATTCAACATCAAGGATCAGAAAGCTTTACAACTGAAAAGTTGATCAAGCATCCACAACATTTGGAAAATAGTACTCAGCTCCAATTCCAAACCATAAAAGATGAAAATTGGAGGCATTTATGTCACCCTTTGCCTCTTCCTCCTTATGGGTTATCACAGCATCTGCAATCAAAATGGATCAAGGGAAAGCTTCTTGGAAGAGGGTCATTTGGCCATGTCTATGCTGGATTCAATAGTACAAATGGACAGTTATGCGCAATTAAGGAAATGAGATCTATCTCTGACTATCATAACTCTGAAACTCATCTCAAAGAGATAAATCAGGAGGTAGCAATACTAAGTCAGCTTTCCCATCGCAACATTGTCCAATATTATGGAAGCGAACTGGGGAAAGGGAAGCTGTCCCTATATTTAGAGTATGTCTCTGGTGGATCAATTCACAAATTGCTTCAGGAATATGGCCCTTTCAAGGAATCTCTTATTAAAAGTTACACCAGGCAGATTCTTCATGCTCTAGCTCACTTGCATGCAAGAAATACTGTGCACAGGGATATCAAAGGCTCAAACATACTAGTAGATCCTAATGGTGTAATCAAGGTTGCTGATTTTGGCATGGCAAAACAAGTAACATCAAGTACTATTGTTCATTCTTTCCAAGGAACCCCTCATTGGATGGCACCTGAGGTGATTCTGAATACAACTTGTGTTGGCCTTGCTGTTGATATATGGAGCTTGGGGTGTACAATTATTGAAATGGCAACAACAAAGCCACCTTGGAGCAAGTATAAAGGGGTTGCTGCAATGTTCAAAATTGCAAACAGCAATGATTACCCGAAAATTCCTTCTCATCTTTCAGAGGATGCACAAAAATTTTTGAGACTTTGCTTTCAAAGAGACCCTCTTTTACGTCCTTCGGCTGCCCAACTGCTGCAACACCCTTTTAGTTTTATTCAAGATAGTTAA 1392 0.3973 MSPWWTRRCQIVAQEDGYKQQQNCRNIESEKSNASNKRKQQNIEKAKSFEETVLVSHQFSRTSTPNRPSFYEILHSERQIYPLPQPSRSLELASVKFASEPALSSSSPSSRSSASLGEDSSGFHRDFGSFIEFAEYECDSGLTIQHQGSESFTTEKLIKHPQHLENSTQLQFQTIKDENWRHLCHPLPLPPYGLSQHLQSKWIKGKLLGRGSFGHVYAGFNSTNGQLCAIKEMRSISDYHNSETHLKEINQEVAILSQLSHRNIVQYYGSELGKGKLSLYLEYVSGGSIHKLLQEYGPFKESLIKSYTRQILHALAHLHARNTVHRDIKGSNILVDPNGVIKVADFGMAKQVTSSTIVHSFQGTPHWMAPEVILNTTCVGLAVDIWSLGCTIIEMATTKPPWSKYKGVAAMFKIANSNDYPKIPSHLSEDAQKFLRLCFQRDPLLRPSAAQLLQHPFSFIQDS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01087 463 SUPERFAMILY Protein kinase-like (PK-like) 182 457 IPR011009 -
Pumo9g01087 463 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 30 457 - -
Pumo9g01087 463 MobiDBLite consensus disorder prediction 101 120 - -
Pumo9g01087 463 FunFam Predicted protein 198 463 - -
Pumo9g01087 463 ProSitePatterns Protein kinases ATP-binding region signature. 208 231 IPR017441 GO:0005524
Pumo9g01087 463 MobiDBLite consensus disorder prediction 31 45 - -
Pumo9g01087 463 SMART serkin_6 202 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01087 463 MobiDBLite consensus disorder prediction 17 45 - -
Pumo9g01087 463 Coils Coil 24 44 - -
Pumo9g01087 463 Gene3D Transferase(Phosphotransferase) domain 1 199 462 - -
Pumo9g01087 463 ProSiteProfiles Protein kinase domain profile. 202 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01087 463 MobiDBLite consensus disorder prediction 101 119 - -
Pumo9g01087 463 Pfam Protein kinase domain 204 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01087 Pumo-Chr9 30040382 30046467 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01087 200 457 MAP Kinase Kinase Kinase AT1G53570 65.504 2.74e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo9g01087 Pkinase 1.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01087 K04421 - cpap:110818034 429.098