Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01084 ATGTCATTGGTTATATCTACAGAGTTGGCTGATACATCATATAGGAATGCCAAGATCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCTCACAATTTTGCACCAGATAAGCACAGAAACATGTATATGACAACAGAATCATACTCCAGTGAGAGTTATGAAAAGTACTTCCGCGATTCACCAACAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGCAAATTCAGTTCACCCTGATGGTGCTTCTTCTTACCTGCTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACACTTCTATCTTGTCTACAAGACATCGCGATGCCTATCGGTCCAATTTTGGATCAGATTTCGTGGAGAATGGGAGCCCGGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAGCTTCAAGAATTGGAGAGGGCTTTGCTTTCTGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTTCAAAGCATGGAGATTGATCCTGACATGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTGCTCCATGACTCGCCAAAGGAGTCCTCATCCTCAGATTCTTCCAATCTCAGCAGCATCAGTAGCACCACCAAAGACACATCACAAAACTCGCCCCAGACACCGAAGGAACTGCTTTATGATTGTGCTAGAGTACTTTCAGAAGGAAATGAAGAGGAAGCCACGTCTATGATAAACAAGCTCCGGCAAATGGTCTCAATTCAGGGTGATCCTTCTCAAAGAATTGCAGCTTACATGGTGGAAGGACTTGCAGCTCGTCTCGCTTCATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAGGAACCTCCTTCCAACGATCGCTTAGCAGCAATGCAGATACTATTTGAGGTCTGCCCGTGTTTTAAATTTGGATTCATCGCTGCAAATGGCGCGATAGCTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAATACATAACTCTAATACAAACACTTGCTTCAATGCCAGGTAGGCCACCTCATGTGAGATTAACCGGGGTGGATGATCCTGAGTCTGTGCAGCGTTCAGTCGGTGGCATAAGCATCATAGGACAAAGACTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTCGAGTTTCGAGCAGTGGCATCGAGCACCTCAATTGTCACGCCATCAATGCTCAACTGTCGTCCCGGGGAAGCACTTGTGGTAAACTTTGCATTCCAGCTTCATCACATGCGCGATGAAACTGTATCGACGGTGAATGAGAGAGACCAACTTCTTCGCATGGTTAAGAGCTTGAATCCAAAGCTTGTAACAGTTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCCAAGATTTGTTGAAGCCTACAATTACTACTCTGCTGTGTTTGACACACTTGATGCAACTCTCCCTAGGGAAAGCCAGGACAGGATGAATGTTGAAAGGCAATGCCTGGCAAAGGACATTGTCAACATCATTGCGTGCGAGGGCGAGGATAGAATAGAACGTTACGAAGTGGCCGGAAAATGGAGGGCGAGGTTGACAATGGCTGGCTTCACTCCATCGCCAATGAGCACAAACGTGAGAGAAGCAATTAGGAAACTCATTATTAAACAATACTGTGAGAGGTTCAAGATAAAGGAGGAAATGGGGGGTCTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1779 0.4519 MSLVISTELADTSYRNAKIYTLKGTDVTPDLSSHNFAPDKHRNMYMTTESYSSESYEKYFRDSPTEELIEPSSSSISANSVHPDGASSYLLRASSGASVIVNNPFDTSILSTRHRDAYRSNFGSDFVENGSPDGLDFDGEMRLKLQELERALLSDEEEEEEDIFETVQSMEIDPDMAEWANPLQDMLLHDSPKESSSSDSSNLSSISSTTKDTSQNSPQTPKELLYDCARVLSEGNEEEATSMINKLRQMVSIQGDPSQRIAAYMVEGLAARLASSGKCIYQALRCKEPPSNDRLAAMQILFEVCPCFKFGFIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPPHVRLTGVDDPESVQRSVGGISIIGQRLEKLAEELGLPFEFRAVASSTSIVTPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLPRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIIACEGEDRIERYEVAGKWRARLTMAGFTPSPMSTNVREAIRKLIIKQYCERFKIKEEMGGLHFGWEDKNLIVASAWK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01084 592 ProSiteProfiles GRAS family profile. 212 592 IPR005202 -
Pumo9g01084 592 MobiDBLite consensus disorder prediction 188 221 - -
Pumo9g01084 592 Pfam GRAS domain family 223 592 IPR005202 -
Pumo9g01084 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 201 587 IPR005202 -
Pumo9g01084 592 MobiDBLite consensus disorder prediction 190 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01084 Pumo-Chr9 30007505 30011909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01084 1 592 GRAS Transcription Factor Family AT1G21450 61.102 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo9g01084 GRAS 1.6e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01084 - - gmx:100807048 1056.2