Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01083 ATGTGTTCATGCGTGATCACCCACATCATTGCATTCCTCTTATTCTGCATCTTAAGTGTGGGCATCGCTTTCTTTTTAACTTTAATCGTTGTTCACCCCAGAAAAGTTAAGTTCAGCGTCACCAATGCTACCCTTATTGAATTCAATTGCACCAACAACAACAATGCCCTCCACTACAACCTTGCACTCAACATCACAGCCTACAATCCCAACACGCATGCCGGCATTTACTACGACCACGTCGAAGCACGTGCGTCGTACGAGGATGTCGAGTTTGGTTCCCAGACCCTGGGATCCTTCTTCCAGCACACCAAGAACGCTAGTGTCTTGAGCCCTGTCTTTAAAGGTGCGAAGTCCCTCAGTGCAGACCAGATTTCAAAGTTGAACATGAAGAGCTCTAGTGTTTACTACATTGATGTGAAGTTGTTCATGAAGGTTAGGTTTAAGGTGGGTTTCAAAATTCCGAAGAAACTCAAGGTTCATTGTGATGACTTGCGGATTCCTCTTCAATCAAATGATAAAACCAAGCTTGTCAATAGGTTTCAAGCCACCCAATGTTATTATCATATTATTAAGATAGGATAA 585 0.4291 MCSCVITHIIAFLLFCILSVGIAFFLTLIVVHPRKVKFSVTNATLIEFNCTNNNNALHYNLALNITAYNPNTHAGIYYDHVEARASYEDVEFGSQTLGSFFQHTKNASVLSPVFKGAKSLSADQISKLNMKSSSVYYIDVKLFMKVRFKVGFKIPKKLKVHCDDLRIPLQSNDKTKLVNRFQATQCYYHIIKIG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01083 194 Pfam Late embryogenesis abundant protein 64 162 IPR004864 -
Pumo9g01083 194 PANTHER OS05G0367900 PROTEIN 6 172 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01083 Pumo-Chr9 29746154 29746738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01083 30 169 SNARE and Associated Proteins AT1G32270 34.483 8.86e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01083 - - aprc:113873272 159.073