Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01082 ATGTGTTCATGCGTGATCACCCACATCATTGCATTCCTCTTATTATGCATCTTAAGTGTGGCCCTCGCTTTCTTTTTAACTTTGATCGTTGTTCACCCCAGAAAGGTTAACTTCAGCGTCACCAATGCTACCCTTATTGAATTCATTTGCACCAACAACAACAATGCCCTCCACTACAACCTTGCACTCAACATCACAGCCTACAATCCCAACACGCATGCCGGCATTTACTACGACCACGTCGAAGCACGTGTGTCGTACGATGATGTCGAGTTTGGTTCCCAGACCCTGGGATCCTTCTTCCAGCACACCAAGAACGCTAGTGTCTTGAGCCCTGTCTTTAAAGGTGCAAAGTCCCTCAGTGCAGACCAGATTTCAAAGTTGAACATGAAGAGCTCTAGTGTTTACCACATTAATGTGAAGTTGTTCATGAAGGTTAGGTTTAAGGTGGGTTTCAAAATTCCGAAGAAACTCAAGGTTCGTTGTGATGACTTGCGGATTCCTCTTCAATCAAATGATAAAACCAAGCTTGTCAATAGGTTTCAAGCCACCCAATGTTATTATAATATTATATAG 576 0.4306 MCSCVITHIIAFLLLCILSVALAFFLTLIVVHPRKVNFSVTNATLIEFICTNNNNALHYNLALNITAYNPNTHAGIYYDHVEARVSYDDVEFGSQTLGSFFQHTKNASVLSPVFKGAKSLSADQISKLNMKSSSVYHINVKLFMKVRFKVGFKIPKKLKVRCDDLRIPLQSNDKTKLVNRFQATQCYYNII 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01082 191 PANTHER OS05G0367900 PROTEIN 3 172 IPR044839 GO:0098542
Pumo9g01082 191 Pfam Late embryogenesis abundant protein 64 162 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01082 Pumo-Chr9 29731197 29731772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01082 30 169 SNARE and Associated Proteins AT1G32270 34.483 3.69e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01082 - - aprc:113873272 156.762