Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01046 ATGGCCAAGATGCTGGGCCTCTTGTTCATGATTGGAGCAATGTTTTTTGGTGTTGGAGCTGAGCCAGTGGAAGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAACCACTCTCATTATCTCAACTGGAATAAGAGCACTTCTGTGTGCAAAAGGTGGATAGGAGTGACCTGCAACACTGACCAATCACAAGTTATAGCTCTCCAACTGACAAGAACTGGATTGAGTGGTCCAATCCCATCCAACACTCTTAGCCGTCTCTCAGCACTCCAAACTGTGAGTCTTGCATCAAACAGCATAACTGGTTCTTTCCCTTCTGGTTTCTCTCAGCTAAAGAATTTGAACTATCTCTATCTCCAATTCAACAATTTTTCTGGTTCATTGCCATCAGACTTTTCAGTTTGGAAGAATCTTAGAGTTGTCAATTTATCCAACAATTCTTTCAATGGGAGCATCCCATTTTCACTTTCAAATTTGACTCATCTCACTTCTTTAGTCCTAGCCAACAACTCTCTTTCAGGTGAAATTCCTGATCTCAATATCCCTACCCTGCAAGAGCTGAATTTTGCCAACAATAACCTTAGTGGGGTTGTGCCTAAATCCCTTGAGAGATTTCCAAGTTGGTCATTTTCTGGTAACAATCTTATTTCTTCACATGCACTACTTGCTCCTTCTTCTGCTGCTCAACCCCCAAATCCTCATCCAACAAGGAAAAAATGCAAAGGGCTTAGGGAACCAGCATTGTTGGGCATCATCATTGGTGGTTGTGTGCTGGGACTTGCAGTGATAGGAGCTTTTCTGATAGTGTGCCGCTATGAGAAAGGTGGTGGTGCAGATGGACAACAAGTGAAGTCTCAGAAAAGAGAAGTATCTAGGAAAAAGGAAGGTTCCGAAAGCCGAGACAAGAACAAGATTGTCTTCTTTGAGGGCTGCAATCTTGCATTTGACTTGGAGGACTTGTTGAGAGCTTCTGCTGAGGTGCTTGGAAAGGGCACGTTTGGGACAGTGTATAAGGCTGCTCTAGAAGATGCAACAACGGTGGCGGTGAAGAGGTTGAAGGATGTCACGGTCGGAAAACGCGAGTTTGAACAGCAGATGGAGATGGTGGGGAGGATTAGGCACCACAATGTGGCTGCACTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTCTCTTCAATGTTGCATGGCAAAAGAGGGGGAGGCAGAATTTCTTTAGACTGGGACAGCCGTTTGAAAATAGCAATTGGGGTAGCAAGAGGCATTGCTCACATCCATGCTCAACATGGAGGGAAACTAGTCCATGGAAACATAAAGGCCTCAAACATCTTCCTAAACTCCCAAGGATATGGCTGTCTATCTGACATTGGTCTTGCAACATTGATGAATCCAGGAATGAGGGCAACAGGATACCGTGCACCGGAAGCAGCCGACACACGCAAAGCAATGCTGGCATCCGATGTCTACAGTTTCGGGGTGCTGCTGCTTGAGCTTCTAACTGGGAGGTCTCCCTTACATGCCAAAGGAGGAGATGAAGTTGTCCACTTGGTTAGGTGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAGGTGTTTGATGTGGAATTGCTAAGGTATCCAAATATAGAAGAGGAAATGGTTGAGATGCTACAAATTGGAATGGCATGTGTTGTGAGAACACCTGATCAGAGGCCAAAAATTGGTGAGGTGGTGAGAATGGTGGAGGAAATTCGTAGAGTGAACACAGAAAATAGATCATCCACTGAGTCTAGATCAGAAGGTTCCACTCCAACCCCTCATGCAATTGAGACATCTTCTACCTCTTTTGCACATTGA 1878 0.4468 MAKMLGLLFMIGAMFFGVGAEPVEEDKQALLDFLHNINHSHYLNWNKSTSVCKRWIGVTCNTDQSQVIALQLTRTGLSGPIPSNTLSRLSALQTVSLASNSITGSFPSGFSQLKNLNYLYLQFNNFSGSLPSDFSVWKNLRVVNLSNNSFNGSIPFSLSNLTHLTSLVLANNSLSGEIPDLNIPTLQELNFANNNLSGVVPKSLERFPSWSFSGNNLISSHALLAPSSAAQPPNPHPTRKKCKGLREPALLGIIIGGCVLGLAVIGAFLIVCRYEKGGGADGQQVKSQKREVSRKKEGSESRDKNKIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVTVGKREFEQQMEMVGRIRHHNVAALRAYYYSKEEKLMVYDYYEQGSVSSMLHGKRGGGRISLDWDSRLKIAIGVARGIAHIHAQHGGKLVHGNIKASNIFLNSQGYGCLSDIGLATLMNPGMRATGYRAPEAADTRKAMLASDVYSFGVLLLELLTGRSPLHAKGGDEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRTPDQRPKIGEVVRMVEEIRRVNTENRSSTESRSEGSTPTPHAIETSSTSFAH 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01046 625 PANTHER OS05G0588300 PROTEIN 7 601 - -
Pumo9g01046 625 CDD STKc_IRAK 330 591 - -
Pumo9g01046 625 Gene3D Ribonuclease Inhibitor 23 232 IPR032675 -
Pumo9g01046 625 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 603 - -
Pumo9g01046 625 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Pumo9g01046 625 ProSiteProfiles Protein kinase domain profile. 324 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01046 625 Pfam Protein tyrosine and serine/threonine kinase 328 586 IPR001245 GO:0004672|GO:0006468
Pumo9g01046 625 Gene3D Transferase(Phosphotransferase) domain 1 399 612 - -
Pumo9g01046 625 MobiDBLite consensus disorder prediction 595 625 - -
Pumo9g01046 625 FunFam pollen receptor-like kinase 1 293 398 - -
Pumo9g01046 625 SUPERFAMILY Protein kinase-like (PK-like) 328 589 IPR011009 -
Pumo9g01046 625 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
Pumo9g01046 625 MobiDBLite consensus disorder prediction 601 625 - -
Pumo9g01046 625 Pfam Leucine rich repeat 81 126 IPR001611 GO:0005515
Pumo9g01046 625 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Pumo9g01046 625 SUPERFAMILY L domain-like 35 210 - -
Pumo9g01046 625 FunFam Probable inactive receptor kinase RLK902 23 182 - -
Pumo9g01046 625 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01046 Pumo-Chr9 26915784 26920194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01046 14 616 Receptor kinase-like Gene Family AT4G23740 55.305 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo9g01046 PK_Tyr_Ser-Thr 6.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01046 - - gmx:100810095 1061.6