Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01036 ATGTATGAAAACATTGAAAATTTTCTGCTAGACAGCGACCTAAATCCCATTAGGTATGAATACAAGGAAATCAAGAAAATGACTAGAGGTTTCAAAATGAAATTGGGTCAAGGAGGTTTCAGCTCTGTATACAAAGGAAAACTACGAAGCGGGCCAGATGTTGCAATAAAGATGTTGAGCAAATCCAAAGCTAATGGACAAGAGTTTACAAGTGAAGTGGCTACCATTGGAAGAATACATCACATGAATGTGGTACGTCTCATTGGATATTGTGTTGAAGGAGAAAAGCATGCTCTAGTATATGAATACATGCCTAATGGTTCATTGGATAAATACATTTTCTCTAAAGAAGGAAGTGTCCCTTTAAGTTATGAGAAAACATATGAAATATCACTTGGTGTAGCTCGCGGAATTGCCTATCTGCATCAAGACTGTGATTTCCAAATTCTACATTTTGATATCAAACCTCATAATATTCTTCTAGATGATAGCTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCAAAGATAGGACCATTGTTTTAACCGGAGTAAGAGGAACTTTGGGTTACATGGCTCCAGAACTATTCTACAAAAATATTGGTGGAGTATCATATAAGGCAGACGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTGGAAGGAGGAACTCAAATCCTCATGCAGAGCATTCAAGCCAACATTACTTCCCCTTTTGGATTTATGATCAATTTAAAGAAGAAAAAGATATTGACATGGATGCCTCAGAAGAGGATAAGATTCTAGTGAAAAAGATGTTCATAGTTGCACTTTGGTGTATACAATTGAAACCAAATGATCGTCCTTCAATGAAGAAGGTTGTAGAAATGCTTGAAGGAAAAGTTGAAAGTCTTGAAATGCCTCCAAAGCCTGTTTTTTATCCCCATGAAATAATTGGACATGATAGTGGAATCAACTCTGGCCAAACATCATGGGTTGATTCAACTAGCTCTAACAAGAATCTTGGCAAAACCAAGTCCAACCATTCAACTGAGAACAATGCTTGA 1068 0.368 MYENIENFLLDSDLNPIRYEYKEIKKMTRGFKMKLGQGGFSSVYKGKLRSGPDVAIKMLSKSKANGQEFTSEVATIGRIHHMNVVRLIGYCVEGEKHALVYEYMPNGSLDKYIFSKEGSVPLSYEKTYEISLGVARGIAYLHQDCDFQILHFDIKPHNILLDDSFIPKVSDFGLAKLYPVKDRTIVLTGVRGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMGSGRRNSNPHAEHSSQHYFPFWIYDQFKEEKDIDMDASEEDKILVKKMFIVALWCIQLKPNDRPSMKKVVEMLEGKVESLEMPPKPVFYPHEIIGHDSGINSGQTSWVDSTSSNKNLGKTKSNHSTENNA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01036 355 SUPERFAMILY Protein kinase-like (PK-like) 15 299 IPR011009 -
Pumo9g01036 355 FunFam PR5-like receptor kinase 104 310 - -
Pumo9g01036 355 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524
Pumo9g01036 355 SMART serkin_6 29 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01036 355 CDD STKc_IRAK 35 300 - -
Pumo9g01036 355 Gene3D Transferase(Phosphotransferase) domain 1 104 308 - -
Pumo9g01036 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Pumo9g01036 355 MobiDBLite consensus disorder prediction 325 355 - -
Pumo9g01036 355 Pfam Protein kinase domain 32 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01036 355 ProSiteProfiles Protein kinase domain profile. 29 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01036 355 Gene3D Phosphorylase Kinase; domain 1 10 103 - -
Pumo9g01036 355 FunFam serine/threonine-protein kinase PBS1-like 3 103 - -
Pumo9g01036 355 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 323 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01036 Pumo-Chr9 26662602 26664602 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01036 3 349 Receptor kinase-like Gene Family AT4G18250 45.556 4.35e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo9g01036 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01036 - - gmx:100170745 606.29