Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01034 ATGTTTTGTCTGTCCAGTGGTTCTAATCCGGAGGATCCTTTTGGAAATTATTTTGATTATAATATTGATTATCCGATAAACTCTGTTTTGGAATGGTCCAAACCGAACTGTAGTCACTGTGAAGCACAAGGCCAGAAATGTAAATGGAAGAATGGTATCCGAAGTGAAACTGAATGTTTCGTTTGCCCAACAAACACCATTCCAACATCAACTATTATAATAATTGCTGCAGGGGCAATAATTGGTTTGATGCTTTTGCTGCTATTGGTCGTTGCATTGGTTTTCGTGTATCGCTATTATGAGATAAAGGCAGAAGACGAGGCTCGGATAGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCTACCAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGCTTTAGTGAAAGTTTAGGGGAAGGAGCTCATGGGGCAGTATTCAAAGGAATGATCTCTCGAGAGATTCTTGTTGCTGTGAAGATACTCAACGACACAGAGGGAGATGGGAAGGATTTTATAAATGAAGTGAGAACCATTGGGAGAATTCATCATGTTAACATTGTTCGCTTGCTTGGATTCTGTGCGGATGGGTTCCACCGTGCTCTTGTCTACGATTTCTTTCCAAGTGGGTCATTGCAGAGATTCTTGGTTCCACCGGATAACAGGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTCGGTGTTGCTAGAGGGGTTGAGTATCTCCACCTTGGCTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTGCTGGATGACGACTTCGTCCCAAAAATCACTGATTTTGGACTTGCCAAGTTGTGTCCCAAAAATCAAAGCACGGTGTCAATGACAGCAGCCAGGGGAACCTTGGGCTACATTGCCCCTGAAGTTTTCTCAAGGAACTTTGGTAATGTGTCTTACAAGTCTGACATTTACAGTTATGGAATGTTGCTGCTAGAGATGGTTGGGGGAAGAAAGAATACAAATGGAAATGATTCAGATGAGGAAAGTTTCCAAGTTCTATACCCTGAATGGATCCATAATTTGCTGGAAGGCAGAGACGTGCAAATTAGTGTTGAGGATGAGGGAAGATGTTAG 1131 0.4182 MFCLSSGSNPEDPFGNYFDYNIDYPINSVLEWSKPNCSHCEAQGQKCKWKNGIRSETECFVCPTNTIPTSTIIIIAAGAIIGLMLLLLLVVALVFVYRYYEIKAEDEARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGMISREILVAVKILNDTEGDGKDFINEVRTIGRIHHVNIVRLLGFCADGFHRALVYDFFPSGSLQRFLVPPDNRDVFLGWEKLQQIALGVARGVEYLHLGCDHRILHFDINPHNVLLDDDFVPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNGNDSDEESFQVLYPEWIHNLLEGRDVQISVEDEGRC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01034 376 Gene3D Phosphorylase Kinase; domain 1 108 209 - -
Pumo9g01034 376 FunFam serine/threonine-protein kinase PBS1-like 103 209 - -
Pumo9g01034 376 Pfam Protein kinase domain 139 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01034 376 SUPERFAMILY Protein kinase-like (PK-like) 117 355 IPR011009 -
Pumo9g01034 376 ProSitePatterns Protein kinases ATP-binding region signature. 141 163 IPR017441 GO:0005524
Pumo9g01034 376 ProSiteProfiles Protein kinase domain profile. 135 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01034 376 PANTHER RUST RESISTANCE KINASE LR10-RELATED 107 369 IPR045874 GO:0004672
Pumo9g01034 376 Gene3D Transferase(Phosphotransferase) domain 1 210 374 - -
Pumo9g01034 376 FunFam Os07g0541700 protein 210 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01034 Pumo-Chr9 26630367 26632315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01034 103 373 Receptor kinase-like Gene Family AT1G66980 49.819 1.99e-84 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo9g01034 Pkinase 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01034 - - gmx:100811260 594.349