Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01030 ATGGGAGACTGGGATTACAACAACCTCATGCATGAGCTACGACAAGGAATGGAGCTGGCAAGGCAGCTTCAAATCTCTCTCCACGTGCCTTCTTGTTCATCCCAAGAAATAAGCCATGAGCTTCTGATTCAGAAGATCATAGCCGCGTTTGAAAGGGCACTTAAATTGGTGAACATGAAAAAAATGGGGCTAGTGGGGCAAGCTTCTTCTTCTTCATCACAAGTATTACGCTCAATGGTTGCAATGCGAATGTCGCAATCACCACCTTTGAGCGCAAGTCCTCTCAGTGAAAACTCTGACCAAGATCTGAGGGAAATCAACGGTAGTTCCCCCAAAGAGAGGAGGACTATACCAACTTGGAGAAGACTGATTCGAGTTAATCCGGGGATGGGAGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGGCATACATGGAGCCAAGTATCCAAGAGGCTACTATAGATGTGCCCAAAGAAATGTTCAAGGCTGCATGGCCACAAAACAAGTCCAAAGATCTGATCAAGACCCAACTATCTTCGAAATCAATTACCACGGAAACCACACATGCACAATGGCTTCCTCTGCGGTTCCTTCTTCATCAGCACCCCAAGAAAACCAAGAACCAATAAATTTGAGCACAATTCCACAGCAGCAGCAACCAAGTGAGGATCTACTCATGAACCTCCGTGCTGGGCTGAGAGTCCTAACAGAGAACCTAGACCAATCACCACTTGCTTCATCGTTCCACCATTATTTGCATTCAACTTCAACTACAAAATCGGAAGAGCAAGCTTTCCCTTCCACAATAATGATTGAAAACAATAACTTTGCAGAAAATCTTACTTATTTTCCTTCTTATGTGTCCCCTGCAACATCTGACAGAACCAACGTCTCGGTTTCTCCAAATTTGGCAAGTTCTGGACCTGAGATCAATGACATGATCTCAGCGGTTACATCTGCTGCTACCTCGAGCTCTCCAACACTTGCAAGCTTAGAGAATTTCCCATTTGATCAGTTTCATATATTAGACGGCCAAAACTTCACCTTTGATAACCCACCATTCTTCTAA 1089 0.4435 MGDWDYNNLMHELRQGMELARQLQISLHVPSCSSQEISHELLIQKIIAAFERALKLVNMKKMGLVGQASSSSSQVLRSMVAMRMSQSPPLSASPLSENSDQDLREINGSSPKERRTIPTWRRLIRVNPGMGVEGPLDDGYSWRKYGQKGIHGAKYPRGYYRCAQRNVQGCMATKQVQRSDQDPTIFEINYHGNHTCTMASSAVPSSSAPQENQEPINLSTIPQQQQPSEDLLMNLRAGLRVLTENLDQSPLASSFHHYLHSTSTTKSEEQAFPSTIMIENNNFAENLTYFPSYVSPATSDRTNVSVSPNLASSGPEINDMISAVTSAATSSSPTLASLENFPFDQFHILDGQNFTFDNPPFF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01030 362 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 344 IPR044810 GO:0003700
Pumo9g01030 362 FunFam WRKY transcription factor 53 122 199 - -
Pumo9g01030 362 Pfam WRKY DNA -binding domain 137 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01030 362 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01030 362 MobiDBLite consensus disorder prediction 86 112 - -
Pumo9g01030 362 Gene3D WRKY domain 130 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01030 362 SUPERFAMILY WRKY DNA-binding domain 135 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01030 362 ProSiteProfiles WRKY domain profile. 131 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01030 362 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01030 Pumo-Chr9 26519879 26522142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01030 1 255 WRKY Transcription Factor Family AT4G23810 35.294 5.73e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g01030 WRKY 8.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01030 - - ccaj:109795434 423.32