Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01025 ATGGCTGAATTAGATATTGAGCAAATTAATCCAGATGCACGGCATCAATGGCTACGTCCGGCTGAAATTTGTGCAATTCTCCGTGATCATGAGAAGTATCAATTTGCTTCAAAACCTGCACATTTGCCATCAAGTGGTTCAGTTTTCTTATTTGATCGGAAGAAACCGATACGCTTCAGAAGGGATGGCCATAACTGGAAGAAAGAATCTCATCAGAAACTAAAGATTCAAGGAAAGGCTGTGTTGAACTGCTACTATGCCCAGGGAGATAAAAGTGAAAATTTTCAAAGACGTACTTATTGGATGCTTGAAGAGAAACTCTCTCACATTGTTCTCGTTCATTATCGACTAGTGAAGGGAACCAAGGCAAATTCTACACATGCTAAAGAAAATGAAGAATCTCTTCATCAACTTAGTTACCAGGGAACCATGGCAAATTCTACACGTGCTAAAGAAAATGAAGAATCTCTTCATCAACCTAGTTACCAGGGAACCAAGGCAAATTCTACACGAGCTAAAGAAAATGAAGAATCTCTTCATCAACCTAGTTACCAGGTTCCTTCACAAACTATAGACACAAGCATGGACAATGCCAATGTATCAGAAAATGAGGCAGATGAATGCGTATATAAGCTCCAGCAATTCCTGAGAGAGACCTTCTAG 663 0.3967 MAELDIEQINPDARHQWLRPAEICAILRDHEKYQFASKPAHLPSSGSVFLFDRKKPIRFRRDGHNWKKESHQKLKIQGKAVLNCYYAQGDKSENFQRRTYWMLEEKLSHIVLVHYRLVKGTKANSTHAKENEESLHQLSYQGTMANSTRAKENEESLHQPSYQGTKANSTRAKENEESLHQPSYQVPSQTIDTSMDNANVSENEADECVYKLQQFLRETF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01025 220 Pfam CG-1 domain 13 116 IPR005559 GO:0003677
Pumo9g01025 220 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 4 188 - -
Pumo9g01025 220 SMART CG_1_2 9 119 IPR005559 GO:0003677
Pumo9g01025 220 ProSiteProfiles CG-1 DNA-binding domain profile. 6 124 IPR005559 GO:0003677
Pumo9g01025 220 MobiDBLite consensus disorder prediction 144 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01025 Pumo-Chr9 26203388 26208409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01025 4 187 CAMTA Transcription Factor Family AT5G64220 46.154 1.37e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01025 K21596 - gmx:100783055 212.231