Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01016 ATGGACTGTAACAAAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTACTGAAAGGGAATATGCTTGTGCAAAAAAGTTTGCTCTCAAGGCTCGAAATTTGTTTCCTGCACTGGAGGGTCTTTCCCAGTTTCTAACAACACTTGATGTTTATATCTCTGCCGAGAATAAAATAAATGGTGAAATGGATTGGTATGGTATACTTGGAGTGTATCCATTTGCTGATGAAGACACAGTTAGGAAGCAGTACAGAAAGCTGGCTCTAACTCTTCACCCTGACAAAAACAAGTCTCCAGGTGCAGAAGGTGCATTCAAGCTTGTTTCAGAGGCGTGGAGTTTACTATCAGATAAGGTCAAAAGACTAGCATATAACCAGAACAGGGGATTGGGAGGATTTCAGCATAATGCTTCCAACCATGTCGGGACTCAATCAGAAGCACCCAGTTCAAATGGTTATCATAATCTTAACAAGAATGCAACTTCAAGCGTGAGAACTCCAAATAATGATGCTCGGGCACATCCACATCCACCTTCCGTTCCTCCTCCACATACAAATGCTGGTACCTTTTGGACTATCTGTAATAGCTGTAAGACACATTATGAGTATCTCAGGACATATTTGAATCAAACCCTTTTATGTCCTAATTGCAAACAAGCTTTTGTGGCTATAGAGAAAGGTCCGCCTCCCAACGTTTTTAAGTCATCTAAATGGTCTTCTCGGCAACATCATCAGAAGTCTTCTCGGCAACATCCCAATGTTGGAAGGAATCACCCTGTGAATCCAGGAAGAACTGGTGCAGTTTCTCAAAATTTACAATCCAGTGGTCCTATAGGCATATCTTCTTTTAGTAACACAAACTTCCAGTGGGGTCCTCACTCAAGAATGGCTGGCTTTGTTAGAAAAGATGGATCATCTTCTGTTGCTGCTGCAAATGTTAAGCAGCAGTCAAGTGAGACAAGAAGAGAATGTGATGGTCCTATTCATAAGAGGTCTGATGGTCCTTTCAGTAATGCTAAAAAACCTATGAAGAAAATAAGGACAGATGATATGTACATGTACAATACAAATCATACGACCATGAGAGATGGATCAAGCAGTTTGGGCCATTTTTATGAATCAGGAAAAGCTAACATGGGAACAGAAAGGATTCATGTTTTTTCAGGTACTCCTCATAAGCATTACAGCACAAGAGAGTTGTCGTTTTTTGAATTACGGAATATGTTGATTGATAAGGCACAGACTGAAATTCGCAAGAAACTTCAAGTATTGAGATCAATGGCTGAAGCTAAGATTACAAACAAGGACAAAGGAAACAAGAGACAGAAAAGTGCATTCAATGACAAAACAACTGGTCCAGAGAAGCATGGAGGTTCCACTATTAATGGTAACAGGCACGTGGACAGTGATTCTATCCCAGTCAAATCTGATGATTCTGTAAACGAGAAACCAGCCTATGTTACAATCAACGTTCCAGATCCTGATTTTCACAATTTTGACTTGGACAGAACTGAAAATTCTTTTGCGGAGGACCAGGTCTGGGCTGCTTATGATGATGACGATGGAATGCCTCGCTATTATGCTAGAATTCACAAGGTGATTTCCACAAAGCCATTTAGAATGCGAATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGCTTTTACAAAACCTGTGGGGATTTCAGGACTGGCAGGCATGAAATAACTGAATCGTTAAATTCCTTTTCACACAAGGTAAAGTGGACAAAAGGCACCAGAGGAGTTGTTCGCATCTTTCCTGGGAAGGGGGAAGTCTGGGCTCTCTATAGAAACTGGTCTCCTGATTGGGATGAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAAGTGCTTGAAGATTTCAATGAAGAGGAAGGTGTATTGGTCACACCACTTGTTAAAGTTGATGGTTTTAGGACAGTGTTTCAGAGGCGCAGCCATGATCAGACAAGAAAGATTCCTAAAGTGGAGATGTTTCAATTCTCTCATCAGGTTCCTAATTACTTGCTTACCGGGCAAGAAGCTCATAACGCTCCAAAGGCCTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTGGACCTCCTTCAGACAGAAGCTGAAGCTAATGAGGCATTGGATAACATCGGAAAATCAAAGGAAGACACTTTCCCCAGGTCACCTGAAAAACATGCTGCTGGTAAGGGGGAGAATGCTTCAAAACCTAACATAGCAGATGTGTTAGACGAGGATGGTAAACAGGTAAAGTATGATAGATGA 2319 0.4166 MDCNKDEAARAKEIAERKFTEREYACAKKFALKARNLFPALEGLSQFLTTLDVYISAENKINGEMDWYGILGVYPFADEDTVRKQYRKLALTLHPDKNKSPGAEGAFKLVSEAWSLLSDKVKRLAYNQNRGLGGFQHNASNHVGTQSEAPSSNGYHNLNKNATSSVRTPNNDARAHPHPPSVPPPHTNAGTFWTICNSCKTHYEYLRTYLNQTLLCPNCKQAFVAIEKGPPPNVFKSSKWSSRQHHQKSSRQHPNVGRNHPVNPGRTGAVSQNLQSSGPIGISSFSNTNFQWGPHSRMAGFVRKDGSSSVAAANVKQQSSETRRECDGPIHKRSDGPFSNAKKPMKKIRTDDMYMYNTNHTTMRDGSSSLGHFYESGKANMGTERIHVFSGTPHKHYSTRELSFFELRNMLIDKAQTEIRKKLQVLRSMAEAKITNKDKGNKRQKSAFNDKTTGPEKHGGSTINGNRHVDSDSIPVKSDDSVNEKPAYVTINVPDPDFHNFDLDRTENSFAEDQVWAAYDDDDGMPRYYARIHKVISTKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGRHEITESLNSFSHKVKWTKGTRGVVRIFPGKGEVWALYRNWSPDWDENTPDEVIHKYDMVEVLEDFNEEEGVLVTPLVKVDGFRTVFQRRSHDQTRKIPKVEMFQFSHQVPNYLLTGQEAHNAPKACRELDPAATPLDLLQTEAEANEALDNIGKSKEDTFPRSPEKHAAGKGENASKPNIADVLDEDGKQVKYDR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01016 772 MobiDBLite consensus disorder prediction 455 471 - -
Pumo9g01016 772 Pfam DnaJ domain 66 127 IPR001623 -
Pumo9g01016 772 Pfam Domain of unknown function (DUF3444) 490 695 IPR024593 -
Pumo9g01016 772 PANTHER BNAC03G44070D PROTEIN 1 712 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 434 452 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 228 280 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 723 772 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 434 481 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 135 187 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 309 343 - -
Pumo9g01016 772 Gene3D DnaJ domain 63 171 IPR036869 -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 757 772 - -
Pumo9g01016 772 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Pumo9g01016 772 SMART dnaj_3 65 122 IPR001623 -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 320 343 - -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 726 749 - -
Pumo9g01016 772 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 265 280 - -
Pumo9g01016 772 CDD DnaJ 66 119 IPR001623 -
Pumo9g01016 772 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pumo9g01016 772 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pumo9g01016 772 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pumo9g01016 772 MobiDBLite consensus disorder prediction 135 171 - -
Pumo9g01016 772 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01016 Pumo-Chr9 25802511 25804829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01016 4 231 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.051 3.89e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01016 - - gmx:100792212 1353.58