Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01015 ATGGTATGCAGCAGTTGTATAAGGTCTTTGGTTGTTCAAGCTGGAACCTTCGCCAACAGAGTGAAAATCAACGGATTTGGGAGGAGTTTTCGGGCAGTTCAGAGTTTTTCTTATTGGCCGATTCGTGAATACAAGACAATCACAGGGATGATGGTTGATACGGGTTCTATGTCAAGGGCTGGACCCCTTGTTGATATGATGCCAGAGAAAGATGATGATGGTCGGTTTGCCAGTGGAGGATGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGGGGGAAGAGAGTGACAATGGAGGATTTTTATGATATTAAGACATTGAAGATTGGTGGCCAATCAATATGCTTATTTGGAATATTTGATGGTCACGGTGGTTCTCGTGCTGCTGAGTATTTAAAGGAGCATCTCTTTGATAATCTCTTGAAGCATCCAAAATTTTTGACAGATGCCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAAGGACACCTTCAGGGATGATGGATCTACAGCTTCAACAGCGGTTTTGATTGATAACCATCTTTATGTAGCTAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAATAGAAGTGATGAGCGGAAGAGAATCGAGAATGCTGGTGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTAGCAGAACCTGAGATCCAGGACCAGGAGATAGATGAACACATTGAACTGCTTATTCTTGCAAGTGATGGACTCTGGGATGTAGTACAGAATGACGTAAGCTTTGTCTTCCTTCTTAGTCATGCATTTTATTCATATGTGCATATTTAA 942 0.4183 MVCSSCIRSLVVQAGTFANRVKINGFGRSFRAVQSFSYWPIREYKTITGMMVDTGSMSRAGPLVDMMPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLTDAKLAISETYQQTDADFLDSEKDTFRDDGSTASTAVLIDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIDEHIELLILASDGLWDVVQNDVSFVFLLSHAFYSYVHI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01015 313 SMART PP2C_4 79 313 IPR001932 -
Pumo9g01015 313 Pfam Protein phosphatase 2C 91 296 IPR001932 -
Pumo9g01015 313 Gene3D - 81 306 IPR036457 -
Pumo9g01015 313 SUPERFAMILY PP2C-like 85 300 IPR036457 -
Pumo9g01015 313 CDD PP2Cc 89 300 IPR001932 -
Pumo9g01015 313 PANTHER PROTEIN PHOSPHATASE 75 297 IPR015655 GO:0004722|GO:0006470
Pumo9g01015 313 ProSiteProfiles PPM-type phosphatase domain profile. 89 313 IPR001932 -
Pumo9g01015 313 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01015 Pumo-Chr9 25775096 25784516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01015 1 296 PP2C-type Phosphatase Gene Family AT5G53140 70.130 2.58e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01015 K17506 - gmx:100805795 565.844