Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01006 ATGGTATGCAGCAGTTGTATAAGGTCTTTGGTTGTTCAAGCTGGAACCTTCGCCAACAGAGTGAAAATCAACGGATTTGGGAGGAGTTTTCGGGCAGTTCAGAGTTTTTCTTATTGGCCGATTCGTGAATACAAGACAATCACAGGGATGATGGTTGATACGGGTTCTATGTCAAGGGCTGGACCCCTTGTTGATATGATGCCAGAGAAAGATGATGATGGTCGGTTTGCCAGTGGAGGATGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGGGGGAAGAGAGTGACAATGGAGGATTTTTATGATATTAAGACATTGAAGATTGGTGGCCAATCAATATGCTTATTTGGAATATTTGATGGTCACGGTGGTTCTCGTGCTGCTGAGTATTTAAAGGAGCATCTCTTTGATAATCTCTTGAAGCATCCAAAATTTTTGACAGATGCCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAAGGACACCTTCAGGGATGATGGATCTACAGCTTCAACAGCGGTTTTGATTGATAACCATCTTTATGTAGCTAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAATAGAAGTGATGAGCGGAAGAGAATCGAGAATGCTGGTGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTAGCAGAACCTGAGATCCAGGACCAGGAGATAGATGAACACATTGAACTGCTTATTCTTGCAAGTGATGGACTCTGGGATGTAGTACAGAATGACGATGCTGTTTCTCTTGCCCGCACCGAAGAGGAGCCTGAGGCAGCTGCTCGAAAGTTAACAGAAGCAGCATTTTCCCGTGGGAGCGCAGATAACATTACATGCATTGTGGTGCGATTCCATCATGAGAAAGCAGCAGACCTAGCTAATCCTGACAAAGCAGAATCAGCTAGTGCTCAGCATCAGTAG 1074 0.4385 MVCSSCIRSLVVQAGTFANRVKINGFGRSFRAVQSFSYWPIREYKTITGMMVDTGSMSRAGPLVDMMPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLTDAKLAISETYQQTDADFLDSEKDTFRDDGSTASTAVLIDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIDEHIELLILASDGLWDVVQNDDAVSLARTEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHEKAADLANPDKAESASAQHQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01006 357 CDD PP2Cc 89 335 IPR001932 -
Pumo9g01006 357 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Pumo9g01006 357 SMART PP2C_4 79 333 IPR001932 -
Pumo9g01006 357 FunFam Probable protein phosphatase 2C 76 81 341 - -
Pumo9g01006 357 PANTHER PROTEIN PHOSPHATASE 77 335 IPR015655 GO:0004722|GO:0006470
Pumo9g01006 357 SMART PP2C_SIG_2 87 335 IPR001932 -
Pumo9g01006 357 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Pumo9g01006 357 SUPERFAMILY PP2C-like 85 336 IPR036457 -
Pumo9g01006 357 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Pumo9g01006 357 Gene3D - 80 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01006 Pumo-Chr9 25184683 25194829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01006 1 339 PP2C-type Phosphatase Gene Family AT5G53140 71.510 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01006 K17506 - gmx:100813138 664.07