Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00996 ATGAGTTTAAGGGAAGTAGTGGAAGAAGTCAAGCTATTTTACTTGGCAGGGCAGGAAGCGAATGCGGAATTGCTGGTCTGGACTTTGTTATTACTAAGCAGGCATCCTGATTGGCAAGCAAAGGCTAGGGAGGAGGTTTTCCAAGTGTTCGGGAATGAAAAGCCAGATTATGATAGGCTTGGTCAACTTAAAATTGTGTCAATGATTCTACAGGAGAGTCTCAGATTATATCCACCAGTGGTTATGTTCGCTCGGTATCTTCGTAAAGATACAAAACTTGGAGACCTTACAATTCCCGCAGGAGTGGAGCTTGTAGTACCTGTGTCAATGCTACACCAGGATAAGGAGTTTTGGGGAGATGATGCCGGGGAATTCAACCCAGAAAGATTCTCGGAAGGAGTCTCAAAGGCAACAAAAGGCAAGCTTGCATACTTGCCATTTGGATGGGGTCCTCGACTCTGCATAGGACAAAATTTGGCTTGTTAG 486 0.4486 MSLREVVEEVKLFYLAGQEANAELLVWTLLLLSRHPDWQAKAREEVFQVFGNEKPDYDRLGQLKIVSMILQESLRLYPPVVMFARYLRKDTKLGDLTIPAGVELVVPVSMLHQDKEFWGDDAGEFNPERFSEGVSKATKGKLAYLPFGWGPRLCIGQNLAC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00996 161 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 147 156 IPR017972 GO:0005506|GO:0016705
Pumo9g00996 161 SUPERFAMILY Cytochrome P450 1 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS E-class P450 group I signature 154 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 160 - -
Pumo9g00996 161 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 PRINTS P450 superfamily signature 154 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 Gene3D Cytochrome P450 1 161 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00996 161 Pfam Cytochrome P450 1 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00996 Pumo-Chr9 24739428 24740029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00996 1 160 Cytochrome P450 AT3G14680 60.625 2.90e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00996 - K24179 gmx:100801959 316.235