Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00991 ATGAAGACGCCAAAACGCCACTCGCCGCCGGCAAACGCTGGCCGGCGAGTGGATGCCGATTCCGGCGAGATCGTCACGAGGTTCAAGAACGGTCACCGGAGGAGGCTCAAAATCAAGCGAATGAAGTACACTTGCCAGACGAAGATCCGCGTCGGGAATGGCGCCGGTGGCGTGCCTCCGCCGCCGGCCGTGGATTCGGAGGGAGAGAAGAGAGAGATTCACGAGCACGTGGAGATATCGCTGGCGTCGTCGTCGTCGTCATCGGAGGGGGAGGAGCGGTTGTCGTCGAAGCAAAACGACGGCGTTTTGTCGTACGGCTCGGCGTCGGTGATAGGGAGCAGGAAGGAGATGGAGGACGCGGTGAGCGCGGAGATAGGGTTTGCGGCGAAGGAGAGAGGGAAGTGCGACTTCTTCGCCGTGTACGACGGCCACGGCGGAGCTCAGGTGGCGGAGGCATGCCGGGAGAGGCTGCACCGGCTGGTGGCGGAGGAGGTGGAGAGGAGTGATAGCCACGTGGAATGGGACTGGCGGGGAGTGATGGAAGGGTGTTTTCGTAAAATGGACAGCGAGGTCGCCGATAATGCGGCCGTCAGGACGGTGGGTTCCACGGCGGTTGTCGCCGTCGTCGCGGCGGCGGAGGTCGTCGTGGCTAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGGAGGTGAGGCCGTGGACTTGTCTAGTGATCATAAGCCCTACAGGCCCGATGAGTTGATGAGAATCGAAGAGGCCGGTGGAAGGGTCATTAACTGGAATGGCCAGCGTGTGCTTGGTGTTCTTGCCACTTCGCGATCCATAGGAGATCAGTACCTTCGACCTTATGTAATATCAAAACCAGAAGTGACAGTGACGAAGCGAAGCAGCAAGGATGAATTTCTCATACTAGCAAGTGATGGATTGTGGGATGTGATGTCCAGTGAAGTGGCGTGCCAAGTTGTAAGGAAATGCCTCGACGGGCAGATTAGGAGAGTGTGCAATGGAGTTGGGAATCATCAAAACCGTGCAGCCGAGGCTGCAGGCCTCTTGGCTGAGATAGCACTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTTGAGCTAAGAGGAACAGTAACATCTGATTGA 1137 0.5752 MKTPKRHSPPANAGRRVDADSGEIVTRFKNGHRRRLKIKRMKYTCQTKIRVGNGAGGVPPPPAVDSEGEKREIHEHVEISLASSSSSSEGEERLSSKQNDGVLSYGSASVIGSRKEMEDAVSAEIGFAAKERGKCDFFAVYDGHGGAQVAEACRERLHRLVAEEVERSDSHVEWDWRGVMEGCFRKMDSEVADNAAVRTVGSTAVVAVVAAAEVVVANCGDCRAVLGRGGEAVDLSSDHKPYRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRSSKDEFLILASDGLWDVMSSEVACQVVRKCLDGQIRRVCNGVGNHQNRAAEAAGLLAEIALAKGSRDNTSVIVVELRGTVTSD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00991 378 SMART PP2C_4 94 369 IPR001932 -
Pumo9g00991 378 MobiDBLite consensus disorder prediction 79 100 - -
Pumo9g00991 378 MobiDBLite consensus disorder prediction 1 21 - -
Pumo9g00991 378 MobiDBLite consensus disorder prediction 50 100 - -
Pumo9g00991 378 Gene3D - 97 375 IPR036457 -
Pumo9g00991 378 FunFam Protein phosphatase 2C 51 97 378 - -
Pumo9g00991 378 Pfam Protein phosphatase 2C 105 364 IPR001932 -
Pumo9g00991 378 CDD PP2Cc 104 371 IPR001932 -
Pumo9g00991 378 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Pumo9g00991 378 ProSiteProfiles PPM-type phosphatase domain profile. 104 371 IPR001932 -
Pumo9g00991 378 PANTHER PROTEIN PHOSPHATASE 89 371 IPR015655 GO:0004722|GO:0006470
Pumo9g00991 378 SUPERFAMILY PP2C-like 101 372 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00991 Pumo-Chr9 24430824 24434388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00991 96 372 PP2C-type Phosphatase Gene Family AT2G29380 52.189 1.52e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00991 K14497 - gmx:100807235 614.379