Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00964 ATGACACTATTAACCTTGTTCTCGGGGAAATACCAAGTACAAGAAATCGATTACAAGAGATACAAAATCCAAGTTAGTGACGCGGGTGCAGTGGAGGACGCTAACTGCTCCTTCATCCCTCGCTATTTCCTAACGGATGGCATGTTCAGGCCCACGGGCCTGGTCGGCCCAGACGATTTTGGATCACAGCCGTTCATTTTGGACCCAACAGATCCTTTTAGAATTGGGTACTTCAACTGCGCCGATCCAGTCACTGGGGATCCTCTTTATGTTAAGGTGGACACGAGTCGATGTGGCACCCGAAGCCAAGGACATGTCTATGCTCTTTTGGAACCAACGTTGTTTGAGTACAATGTAAAGGACATCAGGGTTGGGTGCAATCTTATGGTGGCTACCTTGGCAAATTGGAAGAGTCTTTCGGAGGCACAAAAGGGGAATGTAACCTACGATGAGATCCATCGGATAATAACTGAGGGGTTTCAGTTGTCGTATTTGCTTGTTATTTGCGAGAATCGGTGTGGAAAGGGAACAGAGTGTGAGGTTATCAATGAATCCAGCGGAGAAGTCCTGTGCAAGAAGCATTTTTGTCATTACGCCTACCACACTACCGATAAGTGCGAACCTTGGCAACAGTTTTTTGGCTATACTCGAGGAATAGGCAGCAGAATAACATTCAGTACAAAACAATTGGACAACCCAGTTGGACTGCAATATTTCGATGGAGGAATATTCATAGGACGAAATGTTATACCAATTTTTCTGGCTGCCAGATATCTGTTTGGAGTTGTACTTCTCCTTGTGTTATTGATCTACAAATGGCGACGGAGACATTTGTCAATATATGAAAATATTGAAAATTTCTTGCTAGATAGCAATCTAAATCCCATTAGGTACGAATACAAAGAAATCAAGAAAATGACCGGAGGTTTCAAAGTGAAATTGGGTCAAGGGGGCTTTGGCTTTGTATACAAAGGAAAACTTCGAAGTGGGTTGGATGTAGCTGTAAAGATGTTGAGCAAATCCAATGATAATGGGCAAGATTTTATCAATGAAGTAGCTACTATTGGAACAATACACCATGTAAATGTGGTGCGTCTTATTGGATATTGTGTTGAAGGAGACAAGCGTTCTCTAGTTTATGAATTCATGCCTAATGGGTCATTGGATAAATACCTTTTCTCTAAAGAAAAAAGTATCCCTTTAAGCTATGAGAAAATATATGAAATATCTCTTGGAATAGCAGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCGAGTGGGAGGAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACATTATTTTCCCTTTTGGATTTATGATCAATTTAAAGAAGAGAAAAATATTAACATGGAAGATGCCTCCAAAGAGGACAACATTCTAGCTAAAAAGATGTTCATGGTTGCACTTTGGTGTATTCAGTTAAATCCAAGTGATCGTCCTTCGATGAATAAGGTAGTGGAGATGCTTGAAGGGAAGATTGAAATCCTTGAAATGCCTCAAAGGCCTTCCTTTTATAAAAATGAAACATATGGACATGATGATGATATCAGCTCTGACCCAACATCATTCACTAATTCCACTTATTCTGATAGTTATCTTGGTGAAAGCATAACTAGTGATCCACTAAAGACTAGTACTTGA 1677 0.4043 MTLLTLFSGKYQVQEIDYKRYKIQVSDAGAVEDANCSFIPRYFLTDGMFRPTGLVGPDDFGSQPFILDPTDPFRIGYFNCADPVTGDPLYVKVDTSRCGTRSQGHVYALLEPTLFEYNVKDIRVGCNLMVATLANWKSLSEAQKGNVTYDEIHRIITEGFQLSYLLVICENRCGKGTECEVINESSGEVLCKKHFCHYAYHTTDKCEPWQQFFGYTRGIGSRITFSTKQLDNPVGLQYFDGGIFIGRNVIPIFLAARYLFGVVLLLVLLIYKWRRRHLSIYENIENFLLDSNLNPIRYEYKEIKKMTGGFKVKLGQGGFGFVYKGKLRSGLDVAVKMLSKSNDNGQDFINEVATIGTIHHVNVVRLIGYCVEGDKRSLVYEFMPNGSLDKYLFSKEKSIPLSYEKIYEISLGIAADVYSFGMLLMEMASGRRNSNPHAEHSSQHYFPFWIYDQFKEEKNINMEDASKEDNILAKKMFMVALWCIQLNPSDRPSMNKVVEMLEGKIEILEMPQRPSFYKNETYGHDDDISSDPTSFTNSTYSDSYLGESITSDPLKTST 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00964 558 Gene3D Transferase(Phosphotransferase) domain 1 289 413 - -
Pumo9g00964 558 MobiDBLite consensus disorder prediction 528 542 - -
Pumo9g00964 558 SUPERFAMILY Protein kinase-like (PK-like) 298 524 IPR011009 -
Pumo9g00964 558 ProSiteProfiles Protein kinase domain profile. 308 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00964 558 MobiDBLite consensus disorder prediction 519 542 - -
Pumo9g00964 558 PANTHER RUST RESISTANCE KINASE LR10-RELATED 281 414 IPR045874 GO:0004672
Pumo9g00964 558 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Pumo9g00964 558 Gene3D Transferase(Phosphotransferase) domain 1 414 512 - -
Pumo9g00964 558 Pfam Protein tyrosine and serine/threonine kinase 311 414 IPR001245 GO:0004672|GO:0006468
Pumo9g00964 558 FunFam serine/threonine-protein kinase PBS1-like 281 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00964 Pumo-Chr9 22995192 23002402 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00964 415 534 Receptor kinase-like Gene Family AT5G38280 41.129 8.53e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo9g00964 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00964 - - gmx:100820366 708.368