Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00947 ATGCCCAGTGTCAACCCACTTTTTATTGATGCTGTGATTTGTGGTATAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGTTTTGGACCGATCCCAAAACGGTGGCGTGGAATCTGTCAAACAGAAGATAAATTAAACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGAGGCTAGTATTAGTAGAAAACTGAATGCCTTGGAGCTTAGTGCACGTGACTATGAAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTTTGTTCGTGGAGCTAGTGTGTTTGGCTTTGGCAATGGAACTGCAAGCGGTGGATCACCAAAATCTCGAGTTGCAGCCTATAAGGTGTGTTGGCCATCTACTAACTTTCTCGGTGGTGGTGGATGTTTGGATGCAGACATTTTGGCTGCTTTCGAGGCTGCCATAAGTGACGGCGTTAATGTGATTTCGATGTCTTTGGGTTTAGATGATCCCCCGGAATATTTTCAAAGCGTTATGTCAATAGGGTCATTCCATGCAGTTGCCAACAACATAATAGTAGTGGCTTCTGGAGGAAATTCAGGACGTTTTCCTGGAACTGTAACCAATGATGAACCTTGGATGCTCACAGTTGCTGCAAGCACAATTGATAGAGACTTCGCTAGTTTTGTTACACTTGGTGACAAGAAAATTATCAAGTCCATTCTTGCAGCGCTTATTGCCACTATGGAACTCTTGATCCTGAGAAGGTCTCCTGTGGCTTACATTTCTAGAGTGAAAACAGAATTGGGTGTGAAGCCATCTCCATATGTGGCTCCATTTTCAGCAAGGGGTCCCAATCAACTTGAGCCAGCAATCCTCAAGCCTGATGTCACTGCTCCAGGAGTCAACATCATCGCTGCTTATAGTGAAGCCATATCTCCCACAGAACTACATGCTGACAAACGAACAACTCCTTACCTTACTTTGTCCGGCACTTCAATGTCATGTCCTCATGTTGCTGGCCTTGCTGGGTTGCTCAAAGCCCTTCATCCAGATTGA 1044 0.4425 MPSVNPLFIDAVICGIGVWPESKSFSDEGFGPIPKRWRGICQTEDKLNCNRKLIGARYFYKGYEASISRKLNALELSARDYEGHGSHTLSTAGGNFVRGASVFGFGNGTASGGSPKSRVAAYKVCWPSTNFLGGGGCLDADILAAFEAAISDGVNVISMSLGLDDPPEYFQSVMSIGSFHAVANNIIVVASGGNSGRFPGTVTNDEPWMLTVAASTIDRDFASFVTLGDKKIIKSILAALIATMELLILRRSPVAYISRVKTELGVKPSPYVAPFSARGPNQLEPAILKPDVTAPGVNIIAAYSEAISPTELHADKRTTPYLTLSGTSMSCPHVAGLAGLLKALHPD 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00947 347 Gene3D Peptidase S8/S53 domain 253 347 IPR036852 GO:0004252|GO:0006508
Pumo9g00947 347 Gene3D - 218 236 - -
Pumo9g00947 347 PRINTS Subtilisin serine protease family (S8) signature 325 341 IPR015500 -
Pumo9g00947 347 PRINTS Subtilisin serine protease family (S8) signature 80 93 IPR015500 -
Pumo9g00947 347 SUPERFAMILY Subtilisin-like 39 347 IPR036852 GO:0004252|GO:0006508
Pumo9g00947 347 Gene3D Peptidase S8/S53 domain 17 217 IPR036852 GO:0004252|GO:0006508
Pumo9g00947 347 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 231 IPR045051 -
Pumo9g00947 347 ProSitePatterns Serine proteases, subtilase family, serine active site. 326 336 IPR023828 -
Pumo9g00947 347 Pfam Subtilase family 77 346 IPR000209 GO:0006508|GO:0008236
Pumo9g00947 347 ProSiteProfiles Serine proteases, subtilase domain profile. 1 347 - -
Pumo9g00947 347 CDD Peptidases_S8_3 12 347 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00947 Pumo-Chr9 21702722 21704751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00947 8 347 Subtilisin-like Serine Gene Family AT5G58830 42.327 1.06e-89 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00947 - - lja:Lj4g3v1388200.1 406.371