Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo9g00945 | ATGGATGCTGTGATTTGTCGTATAGGTGCTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCGATCCCAAAACGGTGGCGAGGAATCTGTCAAACAGAAGATAAATTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGAGGCTAGTATTGGTAGAAAACTGAATGCCTCGAATTTTAGTGCACGTGACTATGCAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTTTGTTCCAGGAGTTAGTCTATTTGGCTTTGGCAATGGAACAGCAAGTGGTGGATCACCAAAAGCACGAGTTGCAGCCTATAAAGCGTGTTGGCCATCTACTGGCTTGTTCGGTGATGGTGGATGTTATGATGCAGACGTTTTGGCTGCTTTTGAGGCTGCCATAAGTGACGGCGTTAACGTGATTTCGGTGTCTTTGGGTTCAATTATTTCCTCGGAATATTTTCAAAGCGCTATTTCAATAGGGTCCTTCCATGCAGTTGCCAACGACATAACTGTAGTAGCTTCTGGAGGAAATGTAGGACCTATTCCTGGAACTGTATCCAACAATGAACCATGGACGCTCACAGTTGCAGCAAGCACAATTGATAGAGACTTCGCTAGTTATGTTACACTTGGTGACAAGAAAATTATCAAGGGAGCTAGTCTTTCAGAGCATCACTTACCATCTAATAAGATGTACCCATTGATTAGTTCAACTGATGCCAAAGCTAATAATGTAACTATTGTGGACGCTGCTTTGTGCTTAAGAGGAACTCTTGATCCTGAGAAAGTAAAGGGAAAAATATTGGTCTGTTTTGCTGAGGGAACTGGCGTTGATCTGGAAGCTATTAGGATAGGCGTTGTTGGAATGATCTTGACCTATGTCAACACAGGGCTTGAAATTCTAGCCGACCCCCAATTGCTTCCTGCTTCGAATGTTGACTTTGATAATGGCAATTACATTTATAATTACATCAGCAGCACCAAGTCTCCTGTGGCTTACATTTCTAGAGTGAAAACAGAATTGGGTGTGAAGCCATCTCCATATGTGGCTGCATTTTCATCAAGGGGTCCCAATCCCCTTGAGCCAGCAATCCTCAAGCCTGATGTTACTGCTCCAGGAGTCAGCATCATCGCTGCTTATAGTGAAGCCATATCTCCCTCAGGAATAAATGCTGACAAACGAAGAACTCCTTATGTTGCTTTGTCCGGCACTTCAATGGCATGTCCTCATGTTGCTGGCCTTGTTGGGTTGCTCAAAGCCCTTCATCCAGATTGGAGCCCAGCTGCTATTAAGTCAGCAATCACTACCTCAGCAAGTACAATAGATAACACTGGAAGGCCTATCGTGGATACATCATTGAACGAGGCAAATCCATTTGATTATGGAGCCGGTCTCATTCAACCTAATCGTGCTGCGGACCCTGGACTTGTATATGACCTAAATATTGCTGATTATTTGAACTTTTTGTGTGGTCGTGGCTACAACAGTTCCCAGCTTAAGTTGTTCTACGGCAAGCCTTACACTTGTCCAAAGTCCTTCAGTTTAGCAGATTTCAATTATCCAGCAATCACAATTCCTCATTTAGAACCTGGACATTCTCTGAAGGTTACTCGAATTGTTACTAATGTTGGGTCCCCAAGAACGTATAGAGTGCACATCAAGGCACCACCACAAGTTGCAGTTTCAGTTAAGCCTAGGAAACTGAGGTTCAAGAAAAAGGGAGAAAAGAAGGAGTTCAAAGTTACATTGACCTTGAAGCCGCAAACTAAGAACACCACTGATTACGTATTCGGGTGGTTGACGTGGACTGATCACAAGCACCATGTCAGGAGTCCCATTGCAGTTAACATAACACATTAA | 1887 | 0.4335 | MDAVICRIGAWPESKSFSDEGFGPIPKRWRGICQTEDKFHCNRKLIGARYFYKGYEASIGRKLNASNFSARDYAGHGSHTLSTAGGNFVPGVSLFGFGNGTASGGSPKARVAAYKACWPSTGLFGDGGCYDADVLAAFEAAISDGVNVISVSLGSIISSEYFQSAISIGSFHAVANDITVVASGGNVGPIPGTVSNNEPWTLTVAASTIDRDFASYVTLGDKKIIKGASLSEHHLPSNKMYPLISSTDAKANNVTIVDAALCLRGTLDPEKVKGKILVCFAEGTGVDLEAIRIGVVGMILTYVNTGLEILADPQLLPASNVDFDNGNYIYNYISSTKSPVAYISRVKTELGVKPSPYVAAFSSRGPNPLEPAILKPDVTAPGVSIIAAYSEAISPSGINADKRRTPYVALSGTSMACPHVAGLVGLLKALHPDWSPAAIKSAITTSASTIDNTGRPIVDTSLNEANPFDYGAGLIQPNRAADPGLVYDLNIADYLNFLCGRGYNSSQLKLFYGKPYTCPKSFSLADFNYPAITIPHLEPGHSLKVTRIVTNVGSPRTYRVHIKAPPQVAVSVKPRKLRFKKKGEKKEFKVTLTLKPQTKNTTDYVFGWLTWTDHKHHVRSPIAVNITH | 628 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo9g00945 | 628 | Gene3D | - | 498 | 627 | - | - | |
| Pumo9g00945 | 628 | Pfam | Subtilase family | 68 | 459 | IPR000209 | GO:0006508|GO:0008236 | |
| Pumo9g00945 | 628 | CDD | PA_subtilisin_like | 216 | 343 | - | - | |
| Pumo9g00945 | 628 | FunFam | subtilisin-like protease SBT1.5 | 210 | 350 | - | - | |
| Pumo9g00945 | 628 | Gene3D | Peptidase S8/S53 domain | 9 | 494 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo9g00945 | 628 | Gene3D | - | 210 | 350 | - | - | |
| Pumo9g00945 | 628 | Pfam | Fibronectin type-III domain | 526 | 624 | IPR041469 | - | |
| Pumo9g00945 | 628 | FunFam | Subtilisin-like protease SBT1.5 | 498 | 627 | - | - | |
| Pumo9g00945 | 628 | PRINTS | Subtilisin serine protease family (S8) signature | 411 | 427 | IPR015500 | - | |
| Pumo9g00945 | 628 | PRINTS | Subtilisin serine protease family (S8) signature | 72 | 85 | IPR015500 | - | |
| Pumo9g00945 | 628 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 481 | - | - | |
| Pumo9g00945 | 628 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 9 | 624 | IPR045051 | - | |
| Pumo9g00945 | 628 | SUPERFAMILY | Subtilisin-like | 31 | 485 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo9g00945 | 628 | CDD | Peptidases_S8_3 | 9 | 448 | IPR034197 | - | |
| Pumo9g00945 | 628 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 412 | 422 | IPR023828 | - | |
| Pumo9g00945 | 628 | FunFam | Subtilisin-like protease SBT1.5 | 2 | 223 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo9g00945 | Pumo-Chr9 | 21688356 | 21691730 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo9g00945 | 2 | 627 | Subtilisin-like Serine Gene Family | AT5G59810 | 54.574 | 0.0 | 667 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo9g00945 | - | - | ccaj:109807044 | 940.258 |