Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00943 ATGGAAAAACATGAGGAAGAGTCCCTCAGTTTCACCTATGATGCTTTCCTCAGTTTCAGAGGCGAAGATACAAGGCTCACATTTATAGGACATCTTCGTAGAGAGTTGTGCCGGAAGAATATAAACACTTTCCTTGATGAAGAGAACATGAGGATAGGGGAAGGTCTTTCAACTGCTCTATCGAATGCCATTGAAGAATCAAATATTTTAATCATTGTGTTTTCTGAGAACTATGCATCTTCCACATGGTGCCTTGATGAACTTGTTAAGATCCTAGAATATATACGACATCAGAGAAATAGTTATGGTAAACACATGATTGAACACGAAAGGAGGTTTGGCAAAGGCTCCCAGAAAGTGCAAGCTTGGAGGTATGAAATCAATTTGATTGATAAAGTTGTTGGGAAGGTGTACAAAAATATAGTGCCTAAACCATTACATATTGGTCAGAAGCCTGTTGGACTTGGTCCCCGCATAAAAGAGGTGAAGTCACTTCTAGACATGAAGCCTAGTGATGAAACTGTATGCATGTTGGGCATATACGGTCTTGGAGGAATAGGAAAAACAGAACTTGCCAAAGCTTTGTATGACAAGATTGTGCAAGACTTTGATGCTGCAAGTTTTCTTGCTGATGTTAGAGAGAAATCAAGCAAAATCAATGGCATTGAAGATCTACAGAAGACACTTCTATCAGAGATGTTAGAAGAGTTGGAAACTGAATTGGGCAGTCCAAGTAAAGGAATGTATGAAATAAAGCGCAAGCTTCGTTGGAGAAAAGTTCTTTTGGTTCTTGATGATGTTGATGACAAAGACAGGTTAGAAAAGTTGGCAGGAGGATGTGATTGGTTTGGTTCAGGTAGTATAATCATTATAACAACAAGGGACAAAGATGTGCTAATTGCTCATCAAGTTAAAAAGATTTATGAGATGAAAGAGCTTGATGAGAAGCATTCCCTTGAGCTCTTTTGTTGGAATGCCTTCAAACAAAGGCATCCTAAAACAAGCTTTAAAGATGTGTCTTTGCGTGCTATAGATTATGCCAAGCGTCTTCCATTGGCTTTAAAAGTGATAGGCTCCGATTTGGCTACTCTTCACCAAGAATGTCCATATGCTTGGCAATGTGCATTGGAAGAATACGAGAGGACTCTTCCAAATGAAAGGATTCAAAATGTGCTCAAAAAAGCTATGATAGATTGA 1197 0.3885 MEKHEEESLSFTYDAFLSFRGEDTRLTFIGHLRRELCRKNINTFLDEENMRIGEGLSTALSNAIEESNILIIVFSENYASSTWCLDELVKILEYIRHQRNSYGKHMIEHERRFGKGSQKVQAWRYEINLIDKVVGKVYKNIVPKPLHIGQKPVGLGPRIKEVKSLLDMKPSDETVCMLGIYGLGGIGKTELAKALYDKIVQDFDAASFLADVREKSSKINGIEDLQKTLLSEMLEELETELGSPSKGMYEIKRKLRWRKVLLVLDDVDDKDRLEKLAGGCDWFGSGSIIIITTRDKDVLIAHQVKKIYEMKELDEKHSLELFCWNAFKQRHPKTSFKDVSLRAIDYAKRLPLALKVIGSDLATLHQECPYAWQCALEEYERTLPNERIQNVLKKAMID 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00943 398 Pfam NB-ARC domain 161 380 IPR002182 GO:0043531
Pumo9g00943 398 SMART till_3 12 130 IPR000157 GO:0007165
Pumo9g00943 398 PRINTS Disease resistance protein signature 254 268 - -
Pumo9g00943 398 PRINTS Disease resistance protein signature 177 192 - -
Pumo9g00943 398 PRINTS Disease resistance protein signature 347 361 - -
Pumo9g00943 398 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 382 IPR044974 GO:0006952
Pumo9g00943 398 ProSiteProfiles TIR domain profile. 11 141 IPR000157 GO:0007165
Pumo9g00943 398 Gene3D - 312 396 IPR042197 -
Pumo9g00943 398 Gene3D - 7 141 IPR035897 -
Pumo9g00943 398 Gene3D - 142 308 IPR027417 -
Pumo9g00943 398 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 139 IPR035897 -
Pumo9g00943 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 393 IPR027417 -
Pumo9g00943 398 Pfam TIR domain 13 98 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00943 Pumo-Chr9 21655697 21658785 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00943 153 361 WRKY Transcription Factor Family AT5G45050 35.885 2.07e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00943 - - gsj:114376984 541.191