Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00939 ATGTGTACCATTTTCTCAAGTTCCCGATTTGCACTAAAATTTGGGTGGAACTCAAAATCAAAGGCTAACCTGAGGAGATTCCGTGTGAGTGCTATGGACACAGCAGCAGTAGGTAGGGTTTCCAATGGCGGCGGCGGCGGCGTAGTTCGCTTCCCGTTATCTGCATCGAGCGCTTTGGTCATTCAGAAAGGAGACATCACCAAATGGTCCATCGATGGTTCCACCGACGCAATTGTAAATCCTGCTAACGACAGAATGCTTGGTGGTGGTGGTGCCGATGGAGCTATACATAGGGCTGCAGGCCCACAACTTGTTGAAGCATGCCGCACTGTCCCTGAAGTTAGGCCTGGAGTTCGGTGCCCAACAGGGGAAGCAAGGATCACACCTGGTTTTATGCTACCTGCTTCTCATGTTATTCACACTGTTGGCCCAATCTACAGTGCTGATAGTAACCCTGCTGCCTCTCTGGCCAGTGCTTACAGGAATACTTTGAGGATTGCGAAAGAAAACAACATTCGGTATATAGCATTCCCAGCCATATCATGTGGTGTCTATGGTTACCCATATGATGAAGCTGCTACAGTGGCAATTTCTACCATCAAAGAGTTTCCAAATGACTTTAAGGAGGTCCACTTTGTTCTGTTCTCCCCTGATATTTATGACATTTGGTTAAATAAGGTAGATGAGTTGCTTAAAGATTAG 702 0.4687 MCTIFSSSRFALKFGWNSKSKANLRRFRVSAMDTAAVGRVSNGGGGGVVRFPLSASSALVIQKGDITKWSIDGSTDAIVNPANDRMLGGGGADGAIHRAAGPQLVEACRTVPEVRPGVRCPTGEARITPGFMLPASHVIHTVGPIYSADSNPAASLASAYRNTLRIAKENNIRYIAFPAISCGVYGYPYDEAATVAISTIKEFPNDFKEVHFVLFSPDIYDIWLNKVDELLKD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00939 233 Pfam Macro domain 79 196 IPR002589 -
Pumo9g00939 233 SMART YBR022w_8 58 196 IPR002589 -
Pumo9g00939 233 CDD Macro_OAADPr_deacetylase 59 226 - -
Pumo9g00939 233 Gene3D Leucine Aminopeptidase, subunit E, domain 1 49 233 IPR043472 -
Pumo9g00939 233 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 41 230 - -
Pumo9g00939 233 ProSiteProfiles Macro domain profile. 46 231 IPR002589 -
Pumo9g00939 233 SUPERFAMILY Macro domain-like 58 229 IPR043472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00939 64 144 C2H2 Transcription Factor Family AT5G01310 39.362 4.76e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00939 K23518 - gmx:100811169 405.601