Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00938 ATGTTCGCAGAGACAGGACTTCTCTTCCCATATTTTCGAAATTTCTCTCAATTTCAACAACTTGAGGAGTACTGCATGACCCAGAAGTCCAATGCTTCAATGAATGACCTTGTTCAATCTTCTTCTGCAATCTCAGAATATGATTTGTTAATAGAGGGAGATTTGTTCAAAGCACCTGAAACTATTATTGAAGAACCAGCCATGGACCTCGATCCTGTGCAAGCTGCCATCTCAATGATATCTTGTGGGGAGGATGTCTCCTCACAGGGTCTGAAATCATCAGATATTGATGTACTTCAAAATGAACAGCTTCTGAGTGAGGTATTCTACGAGTGCAAAAAGGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTCTCTGATATTATGGAAATCAAGGTTCCAGCTCTGAACATTGAGGAGAATTCAATTCAAGAAAACAAACCACTTCCTGACATGACTCTACCAAAGAGTATCAGTTCAGGAAGTCTGAGTTCAATGGACTGGATGCATGGAGCTGCAATGAAGCCTGCTTTCCTTGATTTCCCTGGAATAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGTGAAGGAGATATAAAGACTCTTAGTAATGGCAACACGAATGTTGGCCAATCTCCCCGGGAGAGGCCTTTTCTTCTCAGCAACTGCACTAGTGAGGAACGTCAAGAAAAGCTCTCCAGATATAGGAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCAGGAAAGCACTTGCTGACAGTCAGCCAAGAATCCGTGGAAGATTTGCAAAGACGGAAGAGTTAGATGTCAAGAGGCAATGA 846 0.4161 MFAETGLLFPYFRNFSQFQQLEEYCMTQKSNASMNDLVQSSSAISEYDLLIEGDLFKAPETIIEEPAMDLDPVQAAISMISCGEDVSSQGLKSSDIDVLQNEQLLSEVFYECKKDLLEKTVIESPLSDIMEIKVPALNIEENSIQENKPLPDMTLPKSISSGSLSSMDWMHGAAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLSNGNTNVGQSPRERPFLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00938 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Pumo9g00938 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
Pumo9g00938 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 158 274 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00938 Pumo-Chr9 21413557 21417589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00938 227 277 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 1.13e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo9g00938 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00938 - - aprc:113853022 476.092