Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00936 ATGGGGAAAAAAGGAGGAAGCTGGTTCTCATCCGTGAAGAATGTTTTCAAGTCATCTTCTAAAGACTCCCCCCTGCAGCCTGAGAAGAAGAAAGTGAACACACAGAAGTTACAGCATGAAGTGCCTGCAGAGGTGGTGTCTTTTGAGCATTTTCTAGCAGAGAGTTCTCCGGATACTGTGACCAATGAAGAGAGTACGACATCAACGCCAGTGACCAAAGATAGAAGCCATGCGATTGCCGTTGCAGCAGCAACTGCCGCAGCTGCTGAAGCTGCCGTGGCGGCTGCTCATGCAGCTGCAAGAGTTGTGAGATTGGCAGGTTACGGGCGCCACTCCAAGGAAGAAAGAGCAGCAACACTCATTCAATCATACTATAGAGGCTACCTGGCTCGACGTGCACTGCGAGCATTGAAGGGATTGGTGAGGCTGCAAGCACTAGTGAGGGGACACAATGTGCGGAAGCAGGCGCAGATGACGATGCGGTGCATGCAAGCACTGGTGAGGGTGCAGGCACGAGTAAGGGCTCGCCGACTCCAATTGAGTCACGCGGAGGAATTAAGAGAACAACAATATGAGAAGAAGAAGAAGAAGAAGGAGGAGGAAGAACCTAAGCCCATGCCCATGCCCATGAGCCCCATGAATGGTTGGGACAATAGGCGTCAAAGTAGCCACAAAATTAAGGAAAACGATTTGAGGAAACATGAAGCTGTAATGAAGAGGGAGAGAGCTCTTGCATACGCTTTCAACTATCAACAGCAACAACAGAAGCAATTTTTGCAGCCAGATTGGAATGGTAACGATGATGCAGGAACAACCTATGAGCGGGAAAAAGCCCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCCCAACCATACAATGTGAGGAACATGGGGCCACGTGAGACCTCTTACATGACTCTTGCTTCTGCAACATCAACTACCACCGATAACATGTCTGAGAAGACCGTAGAAATGGACATGGTTGCAACTCCAGGCCCAACCAACGTTAGAAACATCAGCCCCATGAACCAAGACTTTGTTGATTCAAGCCCAGTTTCCAATAGGCACCATCACGTACCTCCCAGCCCAAATAGACCTAGCTATATGGCCCCAACTCAGTCTGCAAAGGCCAAGGCTCGGGCCCAAGGCCCATCCAAGCCTCGGGTTTCGGCTGGGCCTCAGTGGAACTCCTCAATGAAGGGAGGCTCCACTTGTGACTCGTCTAGCTCAGGAGGTGGAATTGCCGCTTACCAATTTCCAAGGAGCCCAGGCCCGAAAATTAATGGCATTCGATCACAGTCTAGAAGGATTGTGGGTAGCAGTCCAGATTACATTGAAGATTGGGCCCTTCCACTTGGAGCCCATGGTTGGGCATAG 1383 0.5054 MGKKGGSWFSSVKNVFKSSSKDSPLQPEKKKVNTQKLQHEVPAEVVSFEHFLAESSPDTVTNEESTTSTPVTKDRSHAIAVAAATAAAAEAAVAAAHAAARVVRLAGYGRHSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHAEELREQQYEKKKKKKEEEEPKPMPMPMSPMNGWDNRRQSSHKIKENDLRKHEAVMKRERALAYAFNYQQQQQKQFLQPDWNGNDDAGTTYEREKAQWGWNWLERWMSSQPYNVRNMGPRETSYMTLASATSTTTDNMSEKTVEMDMVATPGPTNVRNISPMNQDFVDSSPVSNRHHHVPPSPNRPSYMAPTQSAKAKARAQGPSKPRVSAGPQWNSSMKGGSTCDSSSSGGGIAAYQFPRSPGPKINGIRSQSRRIVGSSPDYIEDWALPLGAHGWA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00936 460 MobiDBLite consensus disorder prediction 391 417 - -
Pumo9g00936 460 PANTHER IQ-DOMAIN 5-RELATED 1 405 - -
Pumo9g00936 460 MobiDBLite consensus disorder prediction 184 216 - -
Pumo9g00936 460 Pfam Protein of unknown function (DUF4005) 353 394 IPR025064 -
Pumo9g00936 460 Gene3D - 112 162 - -
Pumo9g00936 460 Coils Coil 180 201 - -
Pumo9g00936 460 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Pumo9g00936 460 MobiDBLite consensus disorder prediction 16 38 - -
Pumo9g00936 460 MobiDBLite consensus disorder prediction 23 37 - -
Pumo9g00936 460 MobiDBLite consensus disorder prediction 184 205 - -
Pumo9g00936 460 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Pumo9g00936 460 SMART iq_5 136 157 IPR000048 GO:0005515
Pumo9g00936 460 SMART iq_5 113 135 IPR000048 GO:0005515
Pumo9g00936 460 MobiDBLite consensus disorder prediction 350 433 - -
Pumo9g00936 460 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Pumo9g00936 460 Pfam IQ calmodulin-binding motif 141 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00936 Pumo-Chr9 21324564 21331133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00936 1 428 IQD Protein Family AT3G49260 48.913 4.40e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00936 - - gmx:100798026 671.389