Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00930 ATGAATCATATGGACAAGATCCTGAAAATGATATTGGAGCATATCCAAACACCTAGTGAAAGCCATCAGCCTTGTACTGTAACAGAAGATACCAAATTTGTCAATGGATTGAATTCTTTAGACATGCCATGTTCAGACATGCACATTGACAAAATAGAGTCTGTTAAAAATGTCACATCAAGCAATAATTTCTTTCAAAATGATGATCATTTGGAGACTCAATATGGGAGTGCTGTGTGGGACATATTCCGTAGGCAGGATGTACCCAAGCTAACAGAGTACCTAAAGAAACACCACAGAGAATTTCGCCACATAAATAATCTTCCAGTAAACTCTGTGATTCACCCCATTCATGATCAGATCCTTTATTTAAATGAGAAGCATAAAAAGCAATTAAAGCAGGAGTTTGGTGTTGAACCTTGGACATTTGAGCAACACCTTGGGGAGGCTGTTTTCATACCTGCTGGATGCCCACATCAAGTGAGAAACAGAAAGTCTTGCATCAAAGTGGCTCTGGACTTTGTTTCACCTGAGAATGTTCAAGAATGCATTCGATTGACAGAAGAATTTCGGTTACTTCCCAAAGGCCATAGATCTAAGGAAGATAAATTGGAGATAAAGAAGATGGCACTATATGCTGCTGATGTTGCAATAACCGAAGCCACTAAACTGATGAGAGGAAATGATTTGTCGGATGAAGCCAAAGAAGTCCCCCAGCAACACCTTTTACTAAATGACTCTCAACAAAATCAATAG 756 0.3902 MNHMDKILKMILEHIQTPSESHQPCTVTEDTKFVNGLNSLDMPCSDMHIDKIESVKNVTSSNNFFQNDDHLETQYGSAVWDIFRRQDVPKLTEYLKKHHREFRHINNLPVNSVIHPIHDQILYLNEKHKKQLKQEFGVEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVALDFVSPENVQECIRLTEEFRLLPKGHRSKEDKLEIKKMALYAADVAITEATKLMRGNDLSDEAKEVPQQHLLLNDSQQNQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00930 251 ProSiteProfiles JmjC domain profile. 1 191 IPR003347 -
Pumo9g00930 251 MobiDBLite consensus disorder prediction 232 251 - -
Pumo9g00930 251 Pfam JmjC domain, hydroxylase 67 174 IPR003347 -
Pumo9g00930 251 SMART cupin_9 29 191 IPR003347 -
Pumo9g00930 251 Gene3D Cupin 19 200 - -
Pumo9g00930 251 FunFam Transcription factor jumonji (JmjC) domain-containing protein 19 200 - -
Pumo9g00930 251 SUPERFAMILY Clavaminate synthase-like 75 219 - -
Pumo9g00930 251 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 59 225 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00930 Pumo-Chr9 21202379 21228294 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pumo9g00930 JmjC 1.4e-19 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00930 K15601 - gsj:114384813 442.58