Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00866 ATGGAGAGGGTCCTCGGAGGAAAGTTTAAAATCGGAAAAAAAATTGGGAGCGGATCATTCGGTGAAATTCACATTGGGGCACATATCGAGACTTCTGAAATTGTGGCCATCAAGATGGAGAACAGGAAAACCAATCAGCCACAGCTACTGTATGAGGCAAAGTTATATAACACTCTTCAAGGAGGAAGTGGCATTCCAAGAATGAAATGGTGTGGCACTGATGGAGACAACAATGTTCTTGTTATTGAACTTCTCGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGGAATAAGTTTTCACTCAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACAAGGATAGAGTATTTGCACTCCAAAGGATTTTTGCATAGAGACATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGCATATAGGGACCCTTTCACAAATAAACATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTATAATACTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGCAGGCTGCCACCAAAAAGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCCATTGAGATACTTTGCAAGTCATATCCTGTGGAGTTTGCTTCTTACTTTCATTATTGCCGCTCTTTGACATTCGATCAACGGCCAGATTATGGACTTTTGAAGCGCCTGTTACGTAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACCATTCTAAAATATCAACAGATGCAACAGGAAAAGACACAAAGTCAACCAAATGCTCCACTAGCTGTGCCTACCAGTCTTGAACCAGTGGATGAGGATAATCATAAAGGAGTCAATGATTCCACTCAAATTGCTGTGGCAACACCATCAATCAATGTTGATCATCAACGCGTTTTTAAGACAACGGCATCTAATGTTCAGAATCTTAATGCCAAGATAACAACAGAGAAACATACTGTGAACAATGGTTCATCTATGTCAACTGCTATGCCCAGAGTCCCCACAGAAAATATCTCAAAACCAGTAAGGCCTGCAGGAACCTCAAATGTGGGTCACGGATTTGGGAATAAGTATGGTGCTTCAGGAAGCATTTTTCCTTCACTACGCCGAACTTCGTCAACCAGACAATAG 1281 0.4067 MERVLGGKFKIGKKIGSGSFGEIHIGAHIETSEIVAIKMENRKTNQPQLLYEAKLYNTLQGGSGIPRMKWCGTDGDNNVLVIELLGPSLEDLFFFCGNKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKAYRDPFTNKHIPYRENKGLTGTARYASYNTHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATKKQKYDKICKKKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLLRNLFTRAGYDSDYLFDWTILKYQQMQQEKTQSQPNAPLAVPTSLEPVDEDNHKGVNDSTQIAVATPSINVDHQRVFKTTASNVQNLNAKITTEKHTVNNGSSMSTAMPRVPTENISKPVRPAGTSNVGHGFGNKYGASGSIFPSLRRTSSTRQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00866 426 MobiDBLite consensus disorder prediction 371 399 - -
Pumo9g00866 426 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pumo9g00866 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pumo9g00866 426 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00866 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00866 426 PANTHER CASEIN KINASE-RELATED 9 338 - -
Pumo9g00866 426 FunFam CK1 family protein kinase 1 326 - -
Pumo9g00866 426 MobiDBLite consensus disorder prediction 301 327 - -
Pumo9g00866 426 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00866 426 Gene3D Transferase(Phosphotransferase) domain 1 1 341 - -
Pumo9g00866 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00866 Pumo-Chr9 19102277 19109534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00866 4 236 CBL-interacting serine-threonine protein kinases AT4G14580 26.829 5.62e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pumo9g00866 Pkinase 6.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00866 K08960 K08959 gmx:100782913 784.252