Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00827 ATGGCTGTAACCACTCGTTCCCGTGCATCCATCTATGATGTGTTCCTCAGCTTTAGAGGGGAAGATACACGTCTTGGTTTCACCGGCAATCTCTACAAAGCTCTTAGTGACAAGGGAATTCATACTTTCATTGATGATGAGGAGCTTCGGAGAGGAGAGGAAATAACAGCAGCACTTGTGAAGGCAATTGAAGAGTCTAGGATTGCAATCACTGTGCTCTCTACAAACTATGCTTCTTCCTCTTTTTGTTTAGATGAACTTGCAACCATCCTTCACTGTAAGCAGAATAGAGGGTTGTTGGTTATACCGGTCTTTTATATGGTGGATCCTTCTGATGTCAGACACCAGAAAGGTAGCTATGGACAAGCATTGGCTAGGCATGAGAAAAGGTTCAAAGCTAAGAATTCGAAGGAGAAGTTGCAGAATTGGAAGATGGCTTTGCATCAAGTAGCTAACTTGTCTGGCTATCATTTCAAAGATGGGGAAGCATATGAATACAAGTTTATTGGGAGTATTGTTGAGCAGGTTTTTAGGGAGATTAATCGTGCTTGTTGTTTACGTGTTGCGAATTACCCAGTTGGGCTAGAGCCACAAGTGGCAGAAGTAAGGAAGCTTTTGGTTGTTGGATCTGATGATGGTGTCTGCATGATAGGGATCCACGGAATGGGCGGGGCAATTGCTGGAGGACATGATTGGTTTGGTCCTGGCAGCATAATCATCATCACAACCTGGGACAAACAACTGCTAGCATCTCATGAGATTAAAAGAGCATATGAGGTGAAGAAATTGAATAAGAATGATGCTCTTCAATTGCTTAGATGGAATGCTTTTAAAAAGGAAAAAGCTTATCCAAGGTATGAGGAGGTCTTGAATAGTGTAGTAGCTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAAAGTGTAGAAGAATGGGAATCTGCTATCGAACATTATAAAAGAATTCCTAGTGATGAAATCCTAAAGATACTTAAAGTAAGTTTTGATGCTTTGGGTGAAGAACAAAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTGAAAGGGTATAAATGGACAGAGCTTGATGATATACTCCATGTTCTTTGTGACCACTGCATGAAATATCATATTCAGGTGTTGGTTGAAAAATCTCTCATAAAGGTTAGCTATGGTACTGTTGAAATGCACGACTTGGTTCAGGACATGGGTAGAGAAATTGACCGGCAGGGATCACCAAAAGAGCCAAGAAAGCGCAAGAGATTATGGTTACCAAAAGATATAATTCAAGTTTTAAACGACAACACGAAGGTCGGGAATCTATCAATTTTGAATTTTGACAATTGCAAATTTTTAACATGGATACCTGATGTATCTGATCTCCTAAATTTGAAGGAACTTTCATTTAAAGAGTGTGAGAATTTAACTACAGTTCACGACTCAGTTGGTATTTTGGCTAAACTTAAAATACTGAGGGCTTATGGTTGCAGAAAGCTTAGGAGTTTTCCAGCTCTCAACTTGACCTCTCTTGAAACACTTAATCTTACAAAGTGTTCCAGTCTTGAGTATTTTCCAGATATATTAGGAGAGATGGAAAACATAAGGGAACTTTTTTTGACTCACCTTCCCATAAAAGAATTGCCATCTTCATTTCAAAATCTTATTGGACTCCAAAGGTTATTCCTGGGTGATTGTGGAATTGTTCAGTTGCGATGTAGCATTGCCATGTTGCCTGAACTGTCTGTATTTTACATTCAAACAACAGGTGGCAACCGGTAA 1797 0.3957 MAVTTRSRASIYDVFLSFRGEDTRLGFTGNLYKALSDKGIHTFIDDEELRRGEEITAALVKAIEESRIAITVLSTNYASSSFCLDELATILHCKQNRGLLVIPVFYMVDPSDVRHQKGSYGQALARHEKRFKAKNSKEKLQNWKMALHQVANLSGYHFKDGEAYEYKFIGSIVEQVFREINRACCLRVANYPVGLEPQVAEVRKLLVVGSDDGVCMIGIHGMGGAIAGGHDWFGPGSIIIITTWDKQLLASHEIKRAYEVKKLNKNDALQLLRWNAFKKEKAYPRYEEVLNSVVAYASGLPLALEVIGSNLFGKSVEEWESAIEHYKRIPSDEILKILKVSFDALGEEQKSVFLDIACCLKGYKWTELDDILHVLCDHCMKYHIQVLVEKSLIKVSYGTVEMHDLVQDMGREIDRQGSPKEPRKRKRLWLPKDIIQVLNDNTKVGNLSILNFDNCKFLTWIPDVSDLLNLKELSFKECENLTTVHDSVGILAKLKILRAYGCRKLRSFPALNLTSLETLNLTKCSSLEYFPDILGEMENIRELFLTHLPIKELPSSFQNLIGLQRLFLGDCGIVQLRCSIAMLPELSVFYIQTTGGNR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00827 598 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 182 - -
Pumo9g00827 598 SMART till_3 11 153 IPR000157 GO:0007165
Pumo9g00827 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 356 IPR027417 -
Pumo9g00827 598 Gene3D Ribonuclease Inhibitor 429 595 IPR032675 -
Pumo9g00827 598 Pfam TIR domain 12 179 IPR000157 GO:0007165
Pumo9g00827 598 Gene3D - 6 185 IPR035897 -
Pumo9g00827 598 ProSiteProfiles TIR domain profile. 10 180 IPR000157 GO:0007165
Pumo9g00827 598 Gene3D - 262 346 IPR042197 -
Pumo9g00827 598 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 229 574 IPR044974 GO:0006952
Pumo9g00827 598 Pfam NB-ARC domain 236 329 IPR002182 GO:0043531
Pumo9g00827 598 SUPERFAMILY L domain-like 402 592 - -
Pumo9g00827 598 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 156 IPR035897 -
Pumo9g00827 598 SUPERFAMILY "Winged helix" DNA-binding domain 332 438 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00827 Pumo-Chr9 17154779 17157906 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00827 457 590 WRKY Transcription Factor Family AT5G45050 31.111 3.66e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00827 - - vra:106764825 444.506