Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00786 ATGTCTTCTATGGATCTAAAGAAATCTAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAAGTTAGCCAACTCATCAAAAACCACTACCACTGTCACCGCTGCTACCACCAGCAAAAGCATGAAGTTTCTTAAGAGAACACTTTCTCTATCTGAACGTGAAGGAGGGTCAAGCAATAATGTTGTCCCCAAAGGGTACCTAGCTGTTTGTGTTGGAGAAGAGCTTAAGAGGTTCACTATACCAACTGAATATTTGGGTCACCAAGCCTTTCAGATTCTCCTGAGGGAAGCAGAAGAGGAATTTGGGTTTCAACAAACAGGAGTTCTGAGGATTCCTTGTGAAGTGGCTGTTTTTGAGAGCATCTTGAAGATGGTGGAAGGAAAGGAGGACAAGTTTTCCTCCCAAGAATGTAGACTCAGCAACATTGAAGAGATGATGATGGGGTACTGCTCAGAAAACCAGCTTGGTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAG 522 0.4253 MSSMDLKKSNKIREIVRLQQILKKWRKLANSSKTTTTVTAATTSKSMKFLKRTLSLSEREGGSSNNVVPKGYLAVCVGEELKRFTIPTEYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVAVFESILKMVEGKEDKFSSQECRLSNIEEMMMGYCSENQLGYSHHPQSPLCR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00786 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 45 127 IPR003676 GO:0009733
Pumo9g00786 173 Pfam Auxin responsive protein 24 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00786 Pumo-Chr9 15590420 15590941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00786 4 173 Calmodulin-binding Proteins AT4G31320 52.821 4.26e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00786 K14488 - gmx:100799598 302.753