Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00739 ATGCCAGGGTTAACGTGCAACGCTTGCAACACAGAATTCAAAGATGACACAGAGCAAAAGCTTCACTACAAGTCCGAGTGGCACCGCTACAACCTCAAACGCAAGGTTGCTGGTGTTCCTGGGGTGACAGAAGCGCTATTTCTGGCTAGACAATCTGTGCTTGCTCAAGAGAAAAATAAATTGAGTGAAACCCCCATGCTGTATAGCTGCGGTCTTTGTGGAAAGGATTATAAAAGTTCTAAGGCTCATGCTGAACACCTTAAATCACGTGGTCATATGTTGCGGGCCTCTGAAGGAACTAGTAATGCAGATGAGAAGGCAATAATTAAGCCAATTCCACAACGTGTTGTGAATAGGCCTCCTCCTAGAAGAGAGGTAGATAACTCTGAAAATGAGGAAAGTGAAGATGAATGGGAGGAAGTTGATCCTGAAGATGATTTGGTTGATGGTGCTGCAAAATCCATGACTGATTTGAATGTGAATGAGCATGGTGAAAATGTTGATATGGATGAAGATGATGATGACGATGATGACTTTGAGGAGTTAGACCCTTCATGTTGCTTTATGTGTGATCAAGAGCACAAAACAATAGAAGACTGCATGGTTCACATGCACAAGCATCATGGATTCTTCATTCCAGATGTTGAGTATTTGAAGGATCCAAAAGGCCTCCTCAACTATCTTGGCCTTAAGGTCAAAAGGGACTACATGTGTCTCTACTGCAATGATCGATGTTATCCTTTCAGCAGCTTGGAAGCAGTCAGGAAACACATGGAAGCAAAAAGTCATTGTAAAGTGCATTTTGGTGATGGTGATGATGACGAGGAGGTAGAATTAGAAGAATTCTATGATTATAGCAGCAGTTATGTGGATGATCAAGGCAAGCAGCTTGTTGTATCTGGTGATGCATCTAACAATGTAGAACTTGTTGGTGGGTCTGAGCTCATAATCACTAGGAAATCTGGTGATAGAACATCAACCAAAACACTTGGTTCCCGTGAATTTTTGCGTTATTATCGTCAGAAGCCTCGGCCATCACCAGCAAATATGGCCATCACTGCTGCTTTGGCTTCAAGGTACAGGAGCATGGGGTTGACCACTATCCAATCTAGGGAGAAAATTGTGAGGTTGAAAGTGCTGAAGGAAATGAATAGGTCAGGTGTGGAGAATATGCGTACCAAGATAGCTATGAAGAGTAATGTCATCCGGAACCTGCCAAAGAATGTCACATATTAG 1236 0.4272 MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNKLSETPMLYSCGLCGKDYKSSKAHAEHLKSRGHMLRASEGTSNADEKAIIKPIPQRVVNRPPPRREVDNSENEESEDEWEEVDPEDDLVDGAAKSMTDLNVNEHGENVDMDEDDDDDDDFEELDPSCCFMCDQEHKTIEDCMVHMHKHHGFFIPDVEYLKDPKGLLNYLGLKVKRDYMCLYCNDRCYPFSSLEAVRKHMEAKSHCKVHFGDGDDDEEVELEEFYDYSSSYVDDQGKQLVVSGDASNNVELVGGSELIITRKSGDRTSTKTLGSREFLRYYRQKPRPSPANMAITAALASRYRSMGLTTIQSREKIVRLKVLKEMNRSGVENMRTKIAMKSNVIRNLPKNVTY 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00739 411 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Pumo9g00739 411 MobiDBLite consensus disorder prediction 130 145 - -
Pumo9g00739 411 SUPERFAMILY beta-beta-alpha zinc fingers 170 250 IPR036236 -
Pumo9g00739 411 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Pumo9g00739 411 MobiDBLite consensus disorder prediction 115 145 - -
Pumo9g00739 411 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Pumo9g00739 411 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Pumo9g00739 411 PANTHER ZINC FINGER PROTEIN 622 2 410 IPR040025 -
Pumo9g00739 411 SMART c2h2final6 68 92 IPR013087 -
Pumo9g00739 411 SMART c2h2final6 236 263 IPR013087 -
Pumo9g00739 411 SMART c2h2final6 185 207 IPR013087 -
Pumo9g00739 411 SMART c2h2final6 4 28 IPR013087 -
Pumo9g00739 411 Pfam C2H2 type zinc-finger (2 copies) 187 288 IPR041661 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00739 1 411 C2H2 Transcription Factor Family AT4G31420 66.346 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00739 K14816 - gmx:100796317 733.791