Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00682 ATGAGGGACTTGAAAACTTTGCAGAAATTGGTTGCAAGTGTTACAGATTGGGAGACACTTGAGAAGATATCTTGCAAACCTTTCAGGCCTAAATTTTTGGATGTGGCAATATCACTACATGCACCAGAATTGTATAGCAAAGAAGAGTTGGTTCAAATCAGTTATTGCAGAAAACTACTTTCAGGGGTTGATGAATCAAGGTCATTGACAAAGAATGTTAAGAGGGAGTCCCAAAAAAGACAAACTGAAGAAATGCTTGAAGAGGAAAGAGTCATGCCAATGAATAAGAAACCAAGAAAGATAATCTTGACAAACAACGGGCCATCGCCGCCGCCAGATTTGCCTGCAGAATTCAAGAATCGAGTCACTGAGTTGAATGGTTATGATCTTAAATTTGTCATGCACAAGAGACTTTTCTCCTCGGACGTGAACCCGAATAGCAATCGTTTGTCAATGCCAATAAAGGAAATTAAGTGTAATTTCTTCACAGAAGCTGAGATTACAAAATTGGATGAAAGAGAAAAAGGACGACTTCTTGGTGTGGAAGTGACTGTGTTGGATCCATGTCTTAGAGAATTTACCTTACCATTAAAGAAGTGGAGCATGCAAAGGACCGACACCTACAACCTCGTGAAGGATTGGAACAATATTGTCTCTGATAATAAGTTTGAAGCAGATCAAGAACTCCACATATGGTCCTTTAGGGTTGACAATAAGCTTCATTTTCTATTAAACAAACTTTGA 744 0.3871 MRDLKTLQKLVASVTDWETLEKISCKPFRPKFLDVAISLHAPELYSKEELVQISYCRKLLSGVDESRSLTKNVKRESQKRQTEEMLEEERVMPMNKKPRKIILTNNGPSPPPDLPAEFKNRVTELNGYDLKFVMHKRLFSSDVNPNSNRLSMPIKEIKCNFFTEAEITKLDEREKGRLLGVEVTVLDPCLREFTLPLKKWSMQRTDTYNLVKDWNNIVSDNKFEADQELHIWSFRVDNKLHFLLNKL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00682 247 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 67 247 IPR005508 GO:0003677
Pumo9g00682 247 Pfam B3 domain-containing protein At2g31720-like 122 219 IPR005508 GO:0003677
Pumo9g00682 247 Gene3D - 124 245 IPR015300 -
Pumo9g00682 247 SUPERFAMILY DNA-binding pseudobarrel domain 134 242 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00682 Pumo-Chr9 13094354 13095244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00682 124 246 B3 DNA Binding Superfamily AT1G05930 26.190 2.33e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00682 - - gmx:102666575 340.117