Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00670 ATGGAGGGCAGTGACATATCCAGAGTTGATAGTGCAAGAGCCAGTGGTTCTAACATATGGAGGAACAACAGCATGGATGTTTTCTCAACATCGGAACGCGAAGATGATGAAGAGGCTCTCAAATGGGCAGCCATAGAGAGACTCCCCACGTATCTTCGCATTCAGAGAAGCATACTCAAAAATGAAGATGGGAAAGGGAGAGAGGTTGACATCAAGCAACTAGGCCTGACAGAGAGAAAGATTATAGTGGAGAGGCTTGTGAAGATAGCAGAAGAAGATAATGAAAGGTTCTTGTTGAAACTCAGGGAAAGAATGGACAGAGTTGGGCTTGATATTCCAACAATTGAAGTTAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTCGGAGGAAGAGCATTGCCTTCAATGCTGAACTTCTTTGCTAACGTAATAGAGGGGTTCTTAAATTGTCTTCACATAATTCCAAGTCCAAAGAAGCCGTTACATATACTTCAGAATATTAGTGGAATCATAAAGCCTCGAAGAATGACATTGCTTTTGGGGCCACCAGGTTCTGGAAAGACCACTTTGCTGTTAGCGTTGGCCGGAAAACTTGGTAAAGATTTGAAATATTCTGGGAGAGTAACATACAATGGGCATGGGCTTGAAGAGTTTGTGCCACAAAGGACATCAGCTTATATAAGTCAATATGATAACCACATTGGAGAAATGACTGTGAGAGAAACTCTGGCTTTCTCAGCTAGATGTCAAGGGGTTGGACAGAATTATGAGATGTTGGCTGAGCTACTAAGAAGAGAGAAGCAGGCAAAGATTAAACCAGATCCTGACATTGATGCCTATATGAAGGCTGCAGCACTAGGAAGACAGCGGACGAGCGTGGTCACGGATTACATTCTTAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATTAAGGTGTTATTCATGGACGAGATATCGACTGGTTTGGACAGTTCCACAACTTTTCAAATAATCAACTCTATCCGGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCACCAGAAACTTATGAACTATTTGATGATATAATACTATTAACGGATGGCCAAATTGTGTACCAAGGACCAAGAGAAAATGTGCTAGAGTTTTTTGAATCAATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTGCAAGAAGTGACATCAAAAAAGGATCAATGGCAATATTGGGCGCGTAAAGATGAACCTTATAGCTTTGTCACTGTCAAGGATTTTGCTGAAGGATTCCAATTATTTCACATAGGTCAAAAACTTGGAGAGGAGCTAGCCACTCCATTTGACAAGTCTACAGGCCATCCAAATGCATTGACCACGAAGAAGTATGGTGTTAACAAAAAGGAGCTGCTGAGGGCTTGTGCTAGCAGGGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTTAAAGCCACACAACTCATCTATTTAGCTATCATGACAACAACATTATTTCTACGAACTAAGATGCATCACGATACCGTGGAGGATGGAGGAACTTACATGGGTGCCCTTTTCTTTGCAGTCACCGTTGCAATGTTCAATGGAATATCAGAGCTAAATATGGCCATCATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGGCTTATTCTATTCCCCCATGGATTCTCAAAATACCAATAACCCTCATAGAAGTAGCTATTTGGGAAGGCATCTCTTACTATGCCATTGGCTTTGATCCAAATTTTGTAAGGCTTTTAAAACAGTACCTGATAATCCTGTGCATTAACCAGATGGCATCTTCACTATTTCGGTTGATGGCATCATTAGGAAGGGATGTTATAGTTGCAAACACGGTTGGAAGTTTTGCATTACTTGTAGTTCTGGTTTTGGGAGGATTTGTGATTTCGCGAGAGGATGTGCACAAATGGTTTCTGTGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGTCATAGTTGGAGAAAGGTTGCTCCTAATTCCAATGAAACACTGGGAGTTTTGGTACTGAAAACTCGCGGATTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTAGGAGCATTAATTGGTTATGTATTTCTGTTTAATTTTCTGATCACCTTGGCTTTGCAATATCTAAGTCCATTCAGAAAGGATCAAGCAGGGCTCTCCCAAGAGAAATTGCTAGAGAGAAATGCTTCAACAGCTGAAGAGTTAACTCAATTACCAAATGGAAAGAGCTCTTCTGACATAAAGAGGGTAGACGAAGCAAGTATATCATCCAGGTCATTTTCTGGAAGAGTAAGTGATGATAAAGCTAACAGAAGTGAAAGAAGGGGAATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAGATCAAATATTCTGTGGACATGCCACAGGAAATGAAAAAGCAAGGTGTTTTTGAGGAACGTCTAGAACTTTTGAAGGGTGTTAGTGGTGTCTTTAGGCCAGGAGTACTAACAGCTCTGATGGGTGTAAGTGGTGCCGGTAAGACTACATTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGAAGGAAGCATCACAATATCTGGGTACCCAAAGAGGCAAGAAACATTTGCTCGCATCTCAGGATATTGTGAACAATTTGATATCCACTCACCTTATGTTACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGGTTGCCCCATGAAGTTGATCGCGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAACTAGTAGAGCTTAACTCAATAAGAGAAGCACTTGTTGGACTGCCAGGTGAGACTGGACTTTCAACCGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCATCAATAATATTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACGGTGAGAAACACGGTGAACACGGGACGAACCGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTCGATGAGCTGTTACTTTTGAAGTTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCGCCACTGTTCTCATCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGCACAGAAGCATCTCTTAAGGTCAACTTCACCAATGTGTACAGAAACTCAGAACTATACCGGAGAAACAAACAATTGATCCAAGAGCTTAGTATACCTCCTCAAGATTCAAGGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGGTGGCACAATGTAAAGCTTGTCTATGGAAACAGCATTTATCATACTGGAGGAACACATCATATACAGCAGTTAGACTGCTATTTACAATGCTAATAGCATTATTATTTGGGATCATATTTTGGGACATTGGCCTGAAAAGGAGAAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTCACCTTCATTGGAGTGCAAAATGGTGCCTCAGTGCAGCCTATAATAGCGGTAGAGAGAACCGTCTTCTACAGAGAGAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCACTTGCACAGGTTATTATTGAACTTCCCCACATCTTAGTTCAGACCCTGATGTATGGGATTATAGTATATGCAATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTTCACCTTCTATGGTATGATGACCATGGCCATTACCCCCAACCCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATTTGGAGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCCATATGGTGGAAGTGGTACTATTGGATCTGCCCTGTTGCATGGACCTTGAATGGATTGGTGGCTTCCCAATATGGAGACAACAGGCACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGATTTTCTAGGAGTAGTTGCAATTGTGGTGGCTGGTTTCTCGGTATTGTTTGCACTTATCTTTGCCTTTGGAATCAAAGTACTCAACTTCCAAAAACGATGA 4341 0.414 MEGSDISRVDSARASGSNIWRNNSMDVFSTSEREDDEEALKWAAIERLPTYLRIQRSILKNEDGKGREVDIKQLGLTERKIIVERLVKIAEEDNERFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGGRALPSMLNFFANVIEGFLNCLHIIPSPKKPLHILQNISGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKDLKYSGRVTYNGHGLEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGQNYEMLAELLRREKQAKIKPDPDIDAYMKAAALGRQRTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSKKDQWQYWARKDEPYSFVTVKDFAEGFQLFHIGQKLGEELATPFDKSTGHPNALTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKATQLIYLAIMTTTLFLRTKMHHDTVEDGGTYMGALFFAVTVAMFNGISELNMAIMKLPVFYKQRDLLFYPAWAYSIPPWILKIPITLIEVAIWEGISYYAIGFDPNFVRLLKQYLIILCINQMASSLFRLMASLGRDVIVANTVGSFALLVVLVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVAPNSNETLGVLVLKTRGFFPEAYWYWIGVGALIGYVFLFNFLITLALQYLSPFRKDQAGLSQEKLLERNASTAEELTQLPNGKSSSDIKRVDEASISSRSFSGRVSDDKANRSERRGMVLPFQPLSLTFDEIKYSVDMPQEMKKQGVFEERLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKRQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLPHEVDRATRKMFIEEVMELVELNSIREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIKDGYNPATWMLEVTSAGTEASLKVNFTNVYRNSELYRRNKQLIQELSIPPQDSRDLHFDSQYSQTLVAQCKACLWKQHLSYWRNTSYTAVRLLFTMLIALLFGIIFWDIGLKRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVQTLMYGIIVYAMMGFDWTTSKFLWYLFFMYFTFLYFTFYGMMTMAITPNPHVAAILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVASQYGDNRHKLENGQRVEEFVKSYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKVLNFQKR 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00670 1446 Gene3D - 863 1098 IPR027417 -
Pumo9g00670 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
Pumo9g00670 1446 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1446 - -
Pumo9g00670 1446 FunFam ABC transporter G family member 40 863 1093 - -
Pumo9g00670 1446 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Pumo9g00670 1446 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Pumo9g00670 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 423 IPR027417 -
Pumo9g00670 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Pumo9g00670 1446 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Pumo9g00670 1446 Pfam ABC-2 type transporter 1175 1388 IPR013525 GO:0016020|GO:0140359
Pumo9g00670 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1086 IPR027417 -
Pumo9g00670 1446 Pfam ABC-2 type transporter 381 432 IPR043926 GO:0140359
Pumo9g00670 1446 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Pumo9g00670 1446 FunFam ABC transporter G family member 34 153 457 - -
Pumo9g00670 1446 Pfam Plant PDR ABC transporter associated 719 780 IPR013581 -
Pumo9g00670 1446 Gene3D - 153 456 IPR027417 -
Pumo9g00670 1446 SMART AAA_5 175 400 IPR003593 GO:0016887
Pumo9g00670 1446 SMART AAA_5 886 1078 IPR003593 GO:0016887
Pumo9g00670 1446 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00670 Pumo-Chr9 12543177 12552237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00670 874 1061 Calmodulin-binding Proteins AT2G36910 27.000 3.08e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00670 K08711 - gmx:100810505 2696.38