Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00661 ATGGGACCTTTTGGAGGAATAATTCAAGATGTCAAAGGAAGAGTTGAATGTTATAAACAAGATTGGGTTTGTGCAATTTGTTCTGGCGTTAGGATATTGGCTCCAACTTTCTACATATTCTTTGCATCTGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAACAGGGATACAGGTGGAAGCTTGAGCACAGTGGAAACATTGGCATCAACTGCTATTTGCGGAATTATCCACTCAATATTTGGTGGTCAGCCTTTGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTCTATGAGTTTTGCATAAAAACGCCAGAACTAGGTGCCAAGATGTTTTTGCCTTGGGCTGGTTGGGTTTGTGTGTGGACAGCATTCTTGTTGATTATGCTTGCAATTTTCAACGCGTGCACAATTATCACAAGGTTCACAAGAATTGCAGAGGAATTATTTGGCATATTGATTACCGTCCTTTTCTTTCAAGAGGCTATAAAGGGAATCATAGGTGAGTTCAGCACCCCCAAGGCCGGAAATCCTTCATCAGAGGAAAATCAATTCCATTGGCGGTATACAAATGGACTACTTGCAATCATTTTCTCTTTTGGAATACTTTTCACTGCCATGAAAAGTAGAAGAGCAAGAACATGGAGATATGGATCAGGGTGGCTACGAGGTTTCATTGCAGATTATGGGGTGCCAATGATGATAGTGATTTGGACTGGACTATCTTATACTCTACCAGGCAAAATTCCATCTACTGTTCCTAGAAGGCTGGTTTGTCCACTTCCTTGGGAATCTGCTTCTCTCTACCACTGGACAGTAGTAAAGGATATGGGGAAGGTACCCTTGGTTTATATCTTGGGGGCATTTATTCCAGCTGTGATGATAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCTAAGATGGCTCAACAAAAGGAATTTAATCTTCAAAAACCATCTGCTTACCACTATGATATTTTCCTGCTTGGTATAATGACTCTGATTTGCGGTATCCTTGGCCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCAGTTGATCCGAAAGAAGGTGGTAAAAAGAGCCAAGGAATGCATTAAGCAACAAGGAAGCAACTCTGAATTATATGGAAAGATGCAAGCTGTGTTTGTAGAAATGGATACAGCACCTACTGCTAAAGAGTTGGATAATTTGAAGGAGGCTGTAATGAAATCTAATGAAAAGGATGGTGCAAAGGAAAAATTTGATCCTGATAAACATATAGATGCCTATCTACCTGTTCGGGTTAATGAGCAAAGAATGAGTAACTTATTACAGTCTCTTCTGATTGGCCTATCAATTTTTGCCATTTATATCATCAAAATGATACCTACTTCAGTTCTATGGGGATATTTTGCATACATGGCAATTGATAGTCTCCCAGGGAATCAATTTTGGGAAAGGATATTGCTTTTGTTCATCTCACCAAGTCGACGTTACAAAATATTGGAAGGTTCTCATGCCTCATTTGTGGAGTCAGTACCATTCAAGACCATAGCTGTATTCACAATCTTACAGATTGTGTATTTTCTAATCTGTTTTGGAGTGACATGGATACCTATAGGAGGAATACTTTTTCCATTACCTTTTTTCCTTCTCATAACTATAAGAGAGCATTTGCTTCCAAAGCTATTCAAGTCTAATCATCTTCAAGAACTAGATGCTGCTGAATACGAGGAAATTGTTGGTGCTCCACATGTTACACACAATATACCACCAAGGGAAAAGGAGCCAAATGATCCTGAAAGTGATGATAAGAGCTCAGAAGATTATTATGATGCAGAGATATTGGATGAGATGACAACTCACAGGGGAGAATTGAAGCTTAGAACTATAAGTCGAAGTAACAGTAGAAGCTTTAGCCACAGCTTCAGCTACAGCTTCAGTGAAGACAGGCAATATTAG 1998 0.3954 MGPFGGIIQDVKGRVECYKQDWVCAICSGVRILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYEFCIKTPELGAKMFLPWAGWVCVWTAFLLIMLAIFNACTIITRFTRIAEELFGILITVLFFQEAIKGIIGEFSTPKAGNPSSEENQFHWRYTNGLLAIIFSFGILFTAMKSRRARTWRYGSGWLRGFIADYGVPMMIVIWTGLSYTLPGKIPSTVPRRLVCPLPWESASLYHWTVVKDMGKVPLVYILGAFIPAVMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDIFLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRQLIRKKVVKRAKECIKQQGSNSELYGKMQAVFVEMDTAPTAKELDNLKEAVMKSNEKDGAKEKFDPDKHIDAYLPVRVNEQRMSNLLQSLLIGLSIFAIYIIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFISPSRRYKILEGSHASFVESVPFKTIAVFTILQIVYFLICFGVTWIPIGGILFPLPFFLLITIREHLLPKLFKSNHLQELDAAEYEEIVGAPHVTHNIPPREKEPNDPESDDKSSEDYYDAEILDEMTTHRGELKLRTISRSNSRSFSHSFSYSFSEDRQY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00661 665 Pfam HCO3- transporter family 445 536 IPR011531 GO:0006820|GO:0016020
Pumo9g00661 665 Pfam HCO3- transporter family 187 369 IPR011531 GO:0006820|GO:0016020
Pumo9g00661 665 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Pumo9g00661 665 PANTHER ANION EXCHANGE PROTEIN 3 593 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pumo9g00661 665 MobiDBLite consensus disorder prediction 646 665 - -
Pumo9g00661 665 Gene3D Helical hairpin bin 14 56 - -
Pumo9g00661 665 MobiDBLite consensus disorder prediction 601 616 - -
Pumo9g00661 665 MobiDBLite consensus disorder prediction 598 620 - -
Pumo9g00661 665 FunFam probable boron transporter 2 14 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00661 Pumo-Chr9 12422145 12426228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00661 2 644 Antiporters AT5G25430 68.364 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00661 K24194 - gmx:100808880 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00661 9 12422145 12426228 Pumo9g00661 9 12422145 12426228 ECH
Pumo10g00051 10 1108895 1114914 Pumo9g00661 9 12422145 12426228 ECH
Pumo9g00661 9 12422145 12426228 Pumo10g00051 10 1108895 1114914 PCT