Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00660 ATGTTTGGAATATGTGGTCGTGGTGGCAACGACAATGATGGTGAAGATGTAGATGAGAGAGAGCTTGAGGCAAGGGAAGATGGCAGCCAATACAGCCTCACAGGCATTCTTCTCCCTTCTCTCGGTGCCACGGCTGTCTGCAATGGCAGCCGTAGACCAAAGCTTCGCCGTTACATTGTCTCTCCATATAATCGTCGTTACAAACTATGGAACAAGTTTCTGCTGATATTGGTTTTCTACACTGCTTGGATGTGTCCATTTGAATTTGGTTTCCTTGAGAAATCAAATGGTGGAGTGGCTATAACTGACAATGTTGTAAATGGGTTCTTTGCCATCGATATTGTGCTCACCTTCTTCGTTGCCTACCTTGATAAGTTCACATATTTGCTAGTTGATGACCACAAACTCATTGCTTTGAGATATGCTAAATCCTGGTTGATCTTGGATGTCATTGCAACCATTCCTTATGAAGTTGTTATTAAAATTTTGCCACCTTCTCTTCAGTTATATAGTTACTTCAACATTCTTCGCCTTTGGCGCCTCCATCGAGTCAGTGCCATGTTTGCAAGATTGGAAAAGGACAGGAATTATAGCTACTTTTGGGTGCGCTGTTGCAAGCTTACATGTGTTACTCTATTCGCAGTGCATGCTGCTGCATGCTTTTTCTATTTTCTTGCTGCACGGGATAATCCAGAATCTACATGGCTTGGACTTGTTCCTGATGCCATTGACCAGAATCTATGGGGAAAATATGTAGTAGCAATATATTGGTCCATAGTGACCCTTGTATCAGTTGGTTATGGTGATCTACATCCTGTAAATACAAAAGAAATGATATTTGACATTTTTTATATGCTCTTCAATCTTGGACTCACCTCATATCTGATAGGCAACATGACCAACATGGTAGTCCACTGGACAGAAAGAACCAAGAGATATAGAGACACTGTCCAATCTGCCTCAAATTTTGCCAATAGGAATCACTTGCCAAACCGTTTGCAAGAACAGATATTTGCTCATTTGCTTATGAAGTACAGAACTGATTTAGAAGGACTACAGCAGCAAGAGATCATTGATTCCCTTCCAAAAGCCATTCAGTCTAGCATCTCACACTACCTATTCTTTTCAATTATTGACAAAGTGTACTTGTTTCGTGGAGTGTCAAATGATCTACTTTTTCAACTGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGACGTGATTTTGCAAAATGAAGCACCAACAGACTTTTATATATTCATTACTGGAGCTGCAGGAAGATATTACACTCCTCTTTATTTTTATTTACTTTCTTATATTGTTGTTGGTGAGGCAAAGCCTGGAGATGTAGTTGGGGAAACAGGAGTGCTATGTTATAGGCCACAACTGTTTACAGTTCGGACCAAGCGGTTGAGCCAGATTTTGCGTTTGAATCGAACCACATTTCTAAATCTTACTCATTCAAATGTTGGAGATGGAACAATGATCATGAACAATTTTCTTCAGAATTTACATGAATCAGGGGATCCACTGATGAGAGGAATTTTGGCAGAAGCAGAAGCAATGTTGGCTAGGGGCAAAATGGATTTGCCTATTAGTTTATTGTTTGCAGCTAGCAGAGGTGATGATATATTGTTGCATCAACTGCTGAAGAAGGGTTCAGATCCAAATGAACCAGATAAGAATGGAAAGACAGCATTGCATATTGCAGCTTCCAAAGGCAGACACCATTGTGTAGCTTTGCTTCTAGAACATGGGGCTAATCCCAACATCAAAGACTTAGAAGGAAATGTCCCACTATGGGAAGCAATCAAGGGTGGGCATGATTCTGTGATGAAACTTCTTGTAGACAATGGTGCAGACATATCATCTGGTGATGTAGGTTCTCTTGCATGCATTGCTGTTGAGCAAAATAAATTAGAATTTCTCAAGGACATTGTTCAATGTGGTGGTGACGTGACACGGTACACGAGCAGTGGAACCACAGCACTCCATGCTGCAGTGTGTGAAGGAAATGTTGAAATAGTGAAGTTCCTTCTAGAGCATGGAGCAGACATTGATAAGCAAGATGGTAATGGCTTGACTCCAAGGTATTTAGCAGATCAACAATGCCATGAAGAAATACTAAACATATTCCAGAAAGTTGGACACAACAAAGCACCACATGGTATCCCTGCAGCATCCTTTGTTGCAAGGTGTCAAAGTGAACCCACTATACCAGGCATTCCCCAAGGAAGAAAGCCACCTAATCAAGAACTAACATGGTTTGATAATCATCAAAGAAGAAGGGTCAGCCCTTTCCACAATTCCTTTTTTGGGATAATGTCTGCAAATTATGATAAAAAAGATTGCACCACTACATCTCAAAGCAGTCACACTAGTAGAGAAGAATTACCAGCAAGAGTAACTCTTAGTTGTCCAGAGAAAGGTGAACGTGCCAAAAAGCTTGTTTTTCTGCCACAGTCCCTTGAAGAATTGCTACGTATTGGTGCTCAAAAGTTTGATATCTCTCCCACCAAAATATTGACCAAAGAAGGAGCTGAAATTGAAGACATATACGTTATAAGAGATGGTGATATTCTTGTTCTTGAATAG 2604 0.4059 MFGICGRGGNDNDGEDVDERELEAREDGSQYSLTGILLPSLGATAVCNGSRRPKLRRYIVSPYNRRYKLWNKFLLILVFYTAWMCPFEFGFLEKSNGGVAITDNVVNGFFAIDIVLTFFVAYLDKFTYLLVDDHKLIALRYAKSWLILDVIATIPYEVVIKILPPSLQLYSYFNILRLWRLHRVSAMFARLEKDRNYSYFWVRCCKLTCVTLFAVHAAACFFYFLAARDNPESTWLGLVPDAIDQNLWGKYVVAIYWSIVTLVSVGYGDLHPVNTKEMIFDIFYMLFNLGLTSYLIGNMTNMVVHWTERTKRYRDTVQSASNFANRNHLPNRLQEQIFAHLLMKYRTDLEGLQQQEIIDSLPKAIQSSISHYLFFSIIDKVYLFRGVSNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYIFITGAAGRYYTPLYFYLLSYIVVGEAKPGDVVGETGVLCYRPQLFTVRTKRLSQILRLNRTTFLNLTHSNVGDGTMIMNNFLQNLHESGDPLMRGILAEAEAMLARGKMDLPISLLFAASRGDDILLHQLLKKGSDPNEPDKNGKTALHIAASKGRHHCVALLLEHGANPNIKDLEGNVPLWEAIKGGHDSVMKLLVDNGADISSGDVGSLACIAVEQNKLEFLKDIVQCGGDVTRYTSSGTTALHAAVCEGNVEIVKFLLEHGADIDKQDGNGLTPRYLADQQCHEEILNIFQKVGHNKAPHGIPAASFVARCQSEPTIPGIPQGRKPPNQELTWFDNHQRRRVSPFHNSFFGIMSANYDKKDCTTTSQSSHTSREELPARVTLSCPEKGERAKKLVFLPQSLEELLRIGAQKFDISPTKILTKEGAEIEDIYVIRDGDILVLE 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00660 867 FunFam Potassium channel KAT3 69 305 - -
Pumo9g00660 867 Gene3D Jelly Rolls 347 511 IPR014710 -
Pumo9g00660 867 ProSiteProfiles cAMP/cGMP binding motif profile. 383 506 IPR000595 -
Pumo9g00660 867 SMART ANK_2a 629 658 IPR002110 GO:0005515
Pumo9g00660 867 SMART ANK_2a 565 594 IPR002110 GO:0005515
Pumo9g00660 867 SMART ANK_2a 532 561 IPR002110 GO:0005515
Pumo9g00660 867 SMART ANK_2a 662 691 IPR002110 GO:0005515
Pumo9g00660 867 SMART ANK_2a 598 627 IPR002110 GO:0005515
Pumo9g00660 867 PANTHER POTASSIUM CHANNEL AKT1 29 865 IPR045319 GO:0005249|GO:0006813
Pumo9g00660 867 CDD CAP_ED 383 492 IPR000595 -
Pumo9g00660 867 SMART cnmp_10 383 504 IPR000595 -
Pumo9g00660 867 SUPERFAMILY Voltage-gated potassium channels 62 304 - -
Pumo9g00660 867 ProSiteProfiles Ankyrin repeat region circular profile. 662 693 - -
Pumo9g00660 867 Gene3D - 534 717 IPR036770 -
Pumo9g00660 867 Pfam KHA, dimerisation domain of potassium ion channel 804 866 IPR021789 -
Pumo9g00660 867 ProSiteProfiles Ankyrin repeat profile. 662 694 IPR002110 GO:0005515
Pumo9g00660 867 PRINTS EAG/ELK/ERG potassium channel family signature 295 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo9g00660 867 PRINTS EAG/ELK/ERG potassium channel family signature 114 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo9g00660 867 PRINTS EAG/ELK/ERG potassium channel family signature 277 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo9g00660 867 PRINTS EAG/ELK/ERG potassium channel family signature 80 87 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo9g00660 867 PRINTS EAG/ELK/ERG potassium channel family signature 103 113 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo9g00660 867 PRINTS EAG/ELK/ERG potassium channel family signature 251 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo9g00660 867 PRINTS Ankyrin repeat signature 566 581 IPR002110 GO:0005515
Pumo9g00660 867 PRINTS Ankyrin repeat signature 678 692 IPR002110 GO:0005515
Pumo9g00660 867 ProSiteProfiles Ankyrin repeat region circular profile. 565 596 - -
Pumo9g00660 867 Pfam Cyclic nucleotide-binding domain 403 491 IPR000595 -
Pumo9g00660 867 ProSiteProfiles KHA domain profile. 804 867 IPR021789 -
Pumo9g00660 867 ProSiteProfiles Ankyrin repeat region circular profile. 598 629 - -
Pumo9g00660 867 ProSiteProfiles Ankyrin repeat profile. 598 630 IPR002110 GO:0005515
Pumo9g00660 867 Pfam Ankyrin repeats (3 copies) 636 714 IPR002110 GO:0005515
Pumo9g00660 867 Pfam Ankyrin repeats (3 copies) 537 627 IPR002110 GO:0005515
Pumo9g00660 867 Gene3D - 70 304 - -
Pumo9g00660 867 FunFam Potassium channel KAT2 371 510 - -
Pumo9g00660 867 ProSiteProfiles Ankyrin repeat profile. 565 597 IPR002110 GO:0005515
Pumo9g00660 867 Pfam Ion transport protein 68 310 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo9g00660 867 SUPERFAMILY Ankyrin repeat 535 717 IPR036770 -
Pumo9g00660 867 SUPERFAMILY cAMP-binding domain-like 308 507 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00660 Pumo-Chr9 12404898 12412428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00660 13 866 Ion Channels AT2G25600 57.191 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00660 K21867 - gmx:100808832 1528.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00660 9 12404898 12412428 Pumo9g00660 9 12404898 12412428 ECH
Pumo9g00660 9 12404898 12412428 Pumo10g00052 10 1116422 1122928 PCT