Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00657 ATGGCAAAGAAGAAGAATCCATTGGTGTATATGGATGTGTCCATAGATGGTGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCAAAGACTGCTGAAAATTTTCGTGCACTATGTACAGGAGAAAAGGGTGTTGGTCCAAATACTGGAAAATCACTACACTACAAGGGTTCTTTCTTCCATCGAATTGTAAAAGGCTCCATTGCCCAGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATACGGTTCCAAGTTCCCAGATGAGTCACCTAGGCTAAAGCATGATGCTCCAGGCCTTCTATCCATGGCAGTTGCTGATCGTGACACTATTGGTTCTCATTTTACCATCACTTTTAAAGCTGACCCCCATCTTGATAGGAAACATGTAGTCTTTGGCAAGCTTGTGCAAGGGCGTGATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGTGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGGAAAGAAAATAAATAAATCAAAAAAGGGAAGAGATGGATCTTCTGAAACCAATAGTCAGGAAGTGCTGCATAAGGGAAAGCACAAAAAATCTTCAGCTGACAGGAGGAAAAGGAGAAAATATTACTCATCAGAATCAGATAGTTCCTCAGATTCAGACATGAAATCGTCAGAAAGTGATAGTGATGCTGACTCTGATGTATCTTCATCATCTTACACAAGTTCCTCCAGCGATGACAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGGAAAAGAAGAGACAAACACCGAGACAAGAGACGAAGGAAACAAGACAAAAGATCAAAGCGTAGATCAAGAAGGGAATTGGCCGGTCATACTGATTCAGACAGTGAAAGTAAGAGTGACAACAGCTCTGATGGCAAAAGTTGTGCTGCTCTAGTGAAAGATCAGAAACATAAAGATCATTCTCAGAGACATGCTGAAGGTCAGCCTTCCTTGGTTGTGGATAAAGAGTTGCATCCCGTGCACCTTAAAAAGAGGGAGAAACTGGGCATGCTAGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCGTAGCAACGGCACTGGGGCCAACTATAGATCTGACAGAAGTGAAGGGAGGCAGCCTGACATGATGGATGATCAACCAGGCAAATTTAGGAGTCAAAGCATGAGCCCTAAGCTAACCACAAGTATGAGTGTTAGTCCAAGGAGTGAGAGCAAAAGCCCAAGCATTAGTCCAACAAGGAAGTTGAGCAGAAGTCCAAGTGGTAGAAGAAGCCTTCTTGCTCCATTACGGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAAACATCGGCAAGAGCCCAGTGAGAGGTAGGAAGGAAAGAAGTGTCAGTAGAAGCCCTGTGAGAACTCACAATCATGGAAGTGTCAGTAGAAGCCCTGTGAGATCTTGTGGTCATGGAAGTGTCAGTGCAAGCCCTGTAAGATCGCTTTCTCGGGGCCGCCGAATGAGTTCACCCAGAGCACCATCACGAAGATCAATCAGCAGAAGCCCTCTGAGATCTCGTGGTCATAGAAGTGTCAGTGGAAGCCCTGTGAGATCACGTGGTCATAGAAGTGTCAGTGCTAGCCCTGTAGGATCCCTTTCTCGGAGTCACCGTCCCAGAGCACCATCACGAAGATCAATCAGCAGAAGCCCTGTGAGAACTCGCAATCATAGAAGTGTCAGTAGAAGTCCTGTGAGATCTCGTGGTCATAGAAGTGTCAGTGCAAGCCCTGTAAGATCCCTTTCTCATAGCCGCCTGAGTTTACCCAGAGCACCATCACGTAGATCAATCAGCAGAAGCCCTGTGAGAACTCGCAGTCATAAAAGTGTCAGCAGAAGTCCTGTGAGATCTCGTGGTCATAGAAGTGGCAGTGCAAGCCCTGTAAGATCCCTTTCTCAGAGTCACCATAGGAGTTCACCAAGAGCTTCAGGAAGATCAATTAGCAGAAGCCCTGTGAGAGTGTCAAGAAAGAGCATGAGCAGGAGTCCAGTTAGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCATTAGCCGAAGTCCAGTTAGAGCACCAAGCAGAGGCAATCGCCGCAGTTATTCTAGGAGTCGTAGCCCTGTTTGTAGGGCAAGGACTCGTCGTGGTAGGAGCTTGTCTAGAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGAACTCCCTCTCGGTCTCCTCCTATGAGGTCATACCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAAGTTACAGAAGGTACTCGCCTAGGCGTAACAGGAGCCCACTGTCACGCAGAAGAACTCCACCAAGGTTCCGAAGTAGGAGGAGTAGGACACCATCTGTATCACGCAGTTCACGTTACCGAAGTCGACAATATAGTCGAAGTCGTAGCCCTGTCCGCAGTCGTTCACCTCGTGTGGAGAGAAGCAGATCATTGTCCCGGAGCAGGAGTCCATCACAGTCCAGGGCTTCAGTGGAATCACAATCTCCACGAAAAGCAAGCAGGAATACCAAGTCTAGGTCTCCATCTGGAAGCCCAGATGGAAAGAAAGGTCTTGTATCTTATGGAGATGGTTCTCCTGACTCAAGCTAA 2739 0.4629 MAKKKNPLVYMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGEKGVGPNTGKSLHYKGSFFHRIVKGSIAQGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMAVADRDTIGSHFTITFKADPHLDRKHVVFGKLVQGRDILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKINKSKKGRDGSSETNSQEVLHKGKHKKSSADRRKRRKYYSSESDSSSDSDMKSSESDSDADSDVSSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDKHRDKRRRKQDKRSKRRSRRELAGHTDSDSESKSDNSSDGKSCAALVKDQKHKDHSQRHAEGQPSLVVDKELHPVHLKKREKLGMLEEEFPKENGERRSNGTGANYRSDRSEGRQPDMMDDQPGKFRSQSMSPKLTTSMSVSPRSESKSPSISPTRKLSRSPSGRRSLLAPLRRSLSRSPNRRNIGKSPVRGRKERSVSRSPVRTHNHGSVSRSPVRSCGHGSVSASPVRSLSRGRRMSSPRAPSRRSISRSPLRSRGHRSVSGSPVRSRGHRSVSASPVGSLSRSHRPRAPSRRSISRSPVRTRNHRSVSRSPVRSRGHRSVSASPVRSLSHSRLSLPRAPSRRSISRSPVRTRSHKSVSRSPVRSRGHRSGSASPVRSLSQSHHRSSPRASGRSISRSPVRVSRKSMSRSPVRSSARSLSRSSGRVPLRSISRSPVRAPSRGNRRSYSRSRSPVCRARTRRGRSLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPPMRSYRYNGRSDRDRYSSYRRYSPRRNRSPLSRRRTPPRFRSRRSRTPSVSRSSRYRSRQYSRSRSPVRSRSPRVERSRSLSRSRSPSQSRASVESQSPRKASRNTKSRSPSGSPDGKKGLVSYGDGSPDSS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00657 912 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 862 893 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 715 732 - -
Pumo9g00657 912 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Pumo9g00657 912 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pumo9g00657 912 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pumo9g00657 912 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pumo9g00657 912 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Pumo9g00657 912 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Pumo9g00657 912 MobiDBLite consensus disorder prediction 465 479 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 593 626 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 322 373 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 627 642 - -
Pumo9g00657 912 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Pumo9g00657 912 MobiDBLite consensus disorder prediction 216 240 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 520 560 - -
Pumo9g00657 912 Gene3D - 1 175 IPR029000 -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 806 830 - -
Pumo9g00657 912 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 565 592 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 176 912 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 480 511 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 643 708 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 259 296 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 752 772 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 402 439 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 787 801 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 297 313 - -
Pumo9g00657 912 MobiDBLite consensus disorder prediction 176 193 - -
Pumo9g00657 912 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00657 Pumo-Chr9 12321074 12328657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00657 25 170 U-box Gene Family AT5G67530 40.541 1.09e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00657 K09566 - cave:132189182 526.168