Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00654 ATGATGGAGGCCTGCATGAGCTCCCCCGACCTCTCCTCCCGGTGGCTGTCAACGCAATCCGCGTCAACCGCCACTCCGGGACTCGACAAGAGCAGAGCTCCGCCGCCGCCGCAATCCCAGTCTCCCCTACAAAAGCGGTTGCAGACGCTACTGGAAGGCGCTAGAGAGAGCTGGACCTACGCAATTTTCTGGGAGTCTTCTCACGACAACTTCTCCGGCGGTTCCCTTCTCCGTTGGGGCGACGGCTACTACCAGGGCGAGGAGGACAACGACAAAGCCAACGGCAAAGCCCCCAAAACGACGTCGTCGTATTCCGCTGAGCAGGCTCGTCGCAAGAAGGTTCTTCTCGAACTCAACTCCTTGATTTCGGGGCCCTCGTTCTCCGCTGATGACGTGGACGAAGAGGTCACCGACACGGTGTGGTTCTTTCTGCTGTCCATGACTCAGTCCTTTGCCAATGGCACCACCCTCCCGGGCCAAGCTTTCTTCAATTCGACCCCGGTATGGGTCACCGGGCCCGATCGGTTATCTGAATTGGCCTGCGAACGGGCCCGGCAGGGGCAGGTGTATGGGCTTCGGACTATGGTTTGCATACCATCTGCAAACGGCGTCGTTGAGCTGGCCTCCACGGAGGTGATTTTCCAGAACCCTGATCTGATGAACAAAGTGTTGGATTTGTTCAACTTCAACGCAGTCGACGGCCATCCCACTCTACCACCACGACAACGGAAAGATAAAAGGTTGTGTGAAAGAGCAGATACTGGGATGCAGAACCGTGAGAACAACAACTTAACTGAGCAATCTCGAGGCAAAGAGAAGATAAGTGATTCAAAATGCCCATGGCCCATGTTATCAGAAAGTTCTGACGGAGGCAGTGATAGCCCATTTTCACATTCAGACGACTATTCTGGCCCCTCATGA 921 0.5537 MMEACMSSPDLSSRWLSTQSASTATPGLDKSRAPPPPQSQSPLQKRLQTLLEGARESWTYAIFWESSHDNFSGGSLLRWGDGYYQGEEDNDKANGKAPKTTSSYSAEQARRKKVLLELNSLISGPSFSADDVDEEVTDTVWFFLLSMTQSFANGTTLPGQAFFNSTPVWVTGPDRLSELACERARQGQVYGLRTMVCIPSANGVVELASTEVIFQNPDLMNKVLDLFNFNAVDGHPTLPPRQRKDKRLCERADTGMQNRENNNLTEQSRGKEKISDSKCPWPMLSESSDGGSDSPFSHSDDYSGPS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00654 306 PANTHER MYC 25 271 IPR045084 GO:0003700|GO:0006355
Pumo9g00654 306 MobiDBLite consensus disorder prediction 10 27 - -
Pumo9g00654 306 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 43 227 IPR025610 -
Pumo9g00654 306 MobiDBLite consensus disorder prediction 1 46 - -
Pumo9g00654 306 MobiDBLite consensus disorder prediction 252 306 - -
Pumo9g00654 306 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00654 Pumo-Chr9 12189660 12198417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00654 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.959 1.12e-73 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00654 K13422 - gmx:102663214 496.508