Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00650 ATGGCTGAGGCTGAAGTTAATGATCTCCATAAGCACCTTATGGATCTGATCGAGGGCTCCAGGATGCGCTGGACCTATGCTATTTTGTGGCGACGCTCCTATCGCCAGCAGGTGTTGAAGTTCCAAAGCGGCTACTACAGAGGCACGGGAAAGCCCAAGGAAGTTCGCATTTTGGGATCCTCTGTCACCGTCACGGAAGAGGCCACTGACGCTGAGTGGTTCTATAAAATCTCCATGGCTCAGTCGTTCGGGCTCAGTAAGAACTTGCCTGGATACGCTTTCATGGGTGTTCGAGACCAAAAATACGAATGCTTCGAATTCGAGGTTGGGGGAGAGGCACAAGTGGGGGACATGGGAGAGGACCAAGTGGGGCCACCAGTTTGGGATTCAAACATTTCTTTGCATACCCTTGAGGAAAGGAAGGCACTCAAATCATACCCTACAACCTGA 450 0.5111 MAEAEVNDLHKHLMDLIEGSRMRWTYAILWRRSYRQQVLKFQSGYYRGTGKPKEVRILGSSVTVTEEATDAEWFYKISMAQSFGLSKNLPGYAFMGVRDQKYECFEFEVGGEAQVGDMGEDQVGPPVWDSNISLHTLEERKALKSYPTT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00650 149 PANTHER MYC 7 96 IPR045084 GO:0003700|GO:0006355
Pumo9g00650 149 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 95 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00650 Pumo-Chr9 12128203 12128652 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00650 9 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 35.000 1.42e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00650 K13422 - ccaj:109811084 107.071