Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00645 ATGGATTCTCATCTACTTAATTCATTAGCAGTTATCTTGCCCTTTTTCCTCTTCATGATTGTGGTGCTGAAACTACGGAGAAAACTCAAGAAAACTGAGCCATCTTTAAACATACCCCCAGGACCATGGAAACTGCCTATTATAGGAAATATACACCAACTTGTTACATCTACACCACACCGAAAATTAAGAGACTTGGCCAAAATATATGGACCCTTGATGCATCTCCAACTTGGGGAGATCTTCACAATCATTGTTTCCTCACCAGAGTATGCTGAGGAGATACTGAAAACCCATGATGTCATCTTTGCATCAAGGCCTAACTTTCTAGCTTCAGAAATAACGTCCTATGAACACACAACTATTGCTTTTTCACCTTATGGAAATTATTGGAGACAGGTGCGAAAAATATGCGCCATGGAGCTTCTCTCCCAAAAACGTGTGTCATTCCGCCCAATTAGAGAAGAAGAGTTCACCAATCTCGTTAAAATGGTTGGATCACATGAAGGGTCTTCCATCAACCTCTCTGAAGCGGTGCACTCATCATTGTATAATATCATTTCAAGAGCTGCGTTTGGCAAGAAGTGCAAATACCAAGAAGAATTCATATCAGTGGTAAAAGAAGGTGTACTAGTTGCATCAGGTTTTAACATAGGAGATTTGTTTCCTTCTTCTAAATGGCTTCAACATGTTACTGGTTTGAGGCCTAAGCTTGAGAAGCTGCATCGACAAATTGATCGGATACTGGGAGACATCATCAATGATCATAAAGAGGCAAAGTCAAAAGCCAAAGAAGTCAACGGCGAAGCAGAGGAAGATCTGTTAGATGTTCTCCTAAAATTCGAGGAGGGTAACGATAGTAACCAGGGCTTTTGCTTAACTATTAACAATATCAAGGCAGTTATCTCGGACATCATTGCTGGCGGAATTGATGCAGTAGCAACTGCCTTAAATTGGGCAATCGCAGAGATAGTAAGGGATCCAAGAGTAATGAAGAAAGTACAAATTAAGGTGAGAGAGATATTCAATATGAAAGGAAGGGTTGATGAAATTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTAAGGTTACACCCACCAGCTCCTCTTTTACTTCCAAGAGAATGTGGAGAGACATGTGAGATTCATGGGTATCATATACCAGTCAAAGCCAAGGTATTTATCAATGTTTGGGCAATTGGAAGAGATCCAAACTACTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGTTCTATTGACTTCAAAGGGAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGCAGCACCTTTGGTTTGGTAGATGTTGAGCTGGCACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAATGAGGACTTGGACATGACTGAGAAATTTGGAGTGACTGTTGCAAGAAAAGATGATCTATACGTGATACCTGTCACTTATAGTCCTTTCCTGGGAACTGGTGCAGAGAGTAGGGAAGTAAGCAGTGCAGGCAAAGAAGACTGA 1575 0.4032 MDSHLLNSLAVILPFFLFMIVVLKLRRKLKKTEPSLNIPPGPWKLPIIGNIHQLVTSTPHRKLRDLAKIYGPLMHLQLGEIFTIIVSSPEYAEEILKTHDVIFASRPNFLASEITSYEHTTIAFSPYGNYWRQVRKICAMELLSQKRVSFRPIREEEFTNLVKMVGSHEGSSINLSEAVHSSLYNIISRAAFGKKCKYQEEFISVVKEGVLVASGFNIGDLFPSSKWLQHVTGLRPKLEKLHRQIDRILGDIINDHKEAKSKAKEVNGEAEEDLLDVLLKFEEGNDSNQGFCLTINNIKAVISDIIAGGIDAVATALNWAIAEIVRDPRVMKKVQIKVREIFNMKGRVDEICINELKYLKSVVKETLRLHPPAPLLLPRECGETCEIHGYHIPVKAKVFINVWAIGRDPNYWTEPERFYPERFIDSSIDFKGSNFEYIPFGAGRRICPGSTFGLVDVELALAFLLYHFDWKLPNGMKNEDLDMTEKFGVTVARKDDLYVIPVTYSPFLGTGAESREVSSAGKED 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00645 524 FunFam Cytochrome P450 71D8 31 501 - -
Pumo9g00645 524 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 CDD CYP71-like 70 497 - -
Pumo9g00645 524 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Pumo9g00645 524 PANTHER CYTOCHROME P450 71B11-RELATED 21 502 - -
Pumo9g00645 524 Coils Coil 253 273 - -
Pumo9g00645 524 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00645 524 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00645 Pumo-Chr9 11928660 11931280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00645 16 504 Cytochrome P450 AT3G26300 42.126 1.29e-133 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00645 - - gmx:100797504 899.042