Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00629 ATGATTGAACTCTGGAGGGAGTCAAGAATGTCTAAAGAAGTTATTACTACTCCATCAGCTGCTCCTTTTGAGTATGAGATCTTGGATAGTGATGCTGAAGTCCTTAGAACTATTAAAGCCTCGTCCAATCGCACAAATCCATGGATTGAACCCGAAAGGTTGAAACTTAGACACAGAATTGGTCGAGGCCCCTTTGGTGATGTCTGGCTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAGAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTATATTTTAAGTGCCAAGGAGTTGCTAGCGTTTCCTGGCTACATGGAATTTCAGTCTTAAATGGGAGGATATGCATCATTATGAATTTGTATGAGGGTTCAGTTGGTGACAAGATGGCTGGACTCAAAGAAGGAAGGATTTCGTTGCATGATGTCCTAAGGTATGGAATTTATCTGGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGGATCCTCATTCTGAACCTTAAACCATTTAATGTTCTTCTCAATGATAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCCTAGGCTCAGGCATGGCTAAGAGGCTTGGAACTCCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGTCGGTTGTTGAAAAGCATGAAAAACCCAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATATCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCGTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAACTGGCCAATGATGGAGAATGGAGATATCTAGGAAATGTGAAAGTTATTCCAAAATCAGGAAGCACTGGCTACACAGAATGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGACACGGTCCGATCTAGAAAGCTTCCCAATGCATGCAAACCTCAAAACATGGACATCCCAGAAGGAACTGTTGTTGGTTTAGAGCATAACGCAGATCATGGATTCGTCCTCGTGAGGGTCCATGGCATTCATGACCCTATTAGAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTGGTAGCTGGTGATTGGGTACGCCTGAGGGACGAAAACGAGAAACACTCACCGGTGGGCATTCTACACGCCATCAATCGCGACTGGTAG 1239 0.4294 MIELWRESRMSKEVITTPSAAPFEYEILDSDAEVLRTIKASSNRTNPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIREDHVKIVLEKFNELYFKCQGVASVSWLHGISVLNGRICIIMNLYEGSVGDKMAGLKEGRISLHDVLRYGIYLAQGVQELHSKGILILNLKPFNVLLNDNDQAILGDVGIPSLLLGSSFLGSGMAKRLGTPNYMAPEQWEPESVVEKHEKPNIPSGLPSSVENILSGCFEYDLRNRPLMVDILSVFQSALNELANDGEWRYLGNVKVIPKSGSTGYTEWFLSKDHLQVGDTVRSRKLPNACKPQNMDIPEGTVVGLEHNADHGFVLVRVHGIHDPIRIHMSTLERVTFGLVAGDWVRLRDENEKHSPVGILHAINRDW 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00629 412 PANTHER OS06G0639500 PROTEIN 10 236 - -
Pumo9g00629 412 SUPERFAMILY Protein kinase-like (PK-like) 51 281 IPR011009 -
Pumo9g00629 412 Pfam Protein tyrosine and serine/threonine kinase 54 234 IPR001245 GO:0004672|GO:0006468
Pumo9g00629 412 Gene3D Transferase(Phosphotransferase) domain 1 51 294 - -
Pumo9g00629 412 ProSiteProfiles Protein kinase domain profile. 54 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00629 Pumo-Chr9 10983178 10988574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00629 38 287 MAP Kinase Kinase Kinase AT2G17700 23.529 7.93e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pumo9g00629 PK_Tyr_Ser-Thr 4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00629 - - gsj:114393396 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00629 9 10983178 10988574 Pumo9g00629 9 10983178 10988574 ECH
Pumo10g00090 10 1572030 1576182 Pumo9g00629 9 10983178 10988574 ECH
Pumo9g00629 9 10983178 10988574 Pumo10g00090 10 1572030 1576182 PCT