Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00605 ATGAGAAACAGTTCGGTCATCATGTGGAGAGAGAAAGCGTTATTGGTGGTGGTACTGCTTCTAGTCCAGCAAATTTGTGCTACCAACAAGCAAGAGCATGGTTGCCCTCCTTCTTCCTGTGGCAAAATCACCAACATAGCTTATCCGTTTCGATTAAAAGGCGACCCCGAAAACTGCGGCCTCGACAGGTATGAGCTGGGTTGTGAAAATAATGTTACGGTTTTATATTTGTACTCTGGAAAATATCATGTGCAGGCAATCAACTACAATAACTTCACAGTCCGAGTGGTTGATCCGGGAGTTCAACAACCAAATTGCTCCTCCCTTCCTCGCTATTTCTTGTCTCGCTCCAATTTCAGTGATACTTACAGTGATGCCACAGATCCATACCAAGCCGGTCAAAATCCAATTAGTAATTGGGCCTGGCTCACTTTCCAGCATATAGTGTTTTTGAATTGTAGTCATCCAGTCACTTACAATCGTAAGTATGTGGATACTGCTTCCTACATCAACTGGGACTCCAAAGGCTATTATATATACGCTATTGCTGGTGACTTAAAAGCAGAGGACTTTGAAGTTGGTTGCCACGTAAAGCTGGTTGCTCCCACATCTTGGTTGGGTTTGGACACTAACAATTATTCCTACACTGCAATGCACAGCGGGCTAGTCTATGGATTTGTGATTTCATGGATGCATCTCGCCTGTAAGAATCATTGTCGACATAGAAAAGGATATTTTTTTAGAGGTCTATATGAACATGGAAATAGATACTGCTATTTCGACTCTTCCAGGCAGAAGCTTCGATGCGCACTGTGTAATCGCCGACGTTCGGGCATTATATGTGGAATACTGGAAAGACTGCAAATCTTTGTCACCGTTGTCGTAATTGTCATTATGTCATGGCCATGCAAATTTTTGATTGGGGTGCCACTGTTTATTGCGCTTTTGATATGTAAATGGAGAAAAAGACATTTGTCAATGTATGAAAGTATTGAAAATTATCTAGAACAAAATAACATGATGCCTATCAGATACTCATACAAGGAAATCAAGAAGATGGCAGGAGGTTTTAAAGATATGTTGGGTGAAGGAGGATATGGCTTTGTGTTCAAGGGAAAGTTGCGTAGCGGGCCTTGTGTAGCAATAAAGATGTTAGGTAAATCGAAAGGAAATGGGCAGGATTTCATTAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTAGTACAATTAATTGGATTTTGTGTTCAAGGGTCAAAACGTGTTCTTGTCTATGAATTCATGCCTAATGGATCTCTTGATAAATTTATTTTTTCCAAAGATGGAAATATACATTTAAGCTATGACAGAATATATAATATATCAATTGGAATAGCCCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAGCCCCACAACATCCTACTAGATGAAAACTTCAACCCAAAGGTCTCTGACTTTGGATTGGCAAAGCTATATCCAATAGATAATAGCATTGTCACAATGACAGCAGCAAGAGGGACAATTGGGTATATGGCTCCAGAATTGTTTTATAAAAATATTGGGGGAATATCCCATAAGGTTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGTAAGCAAGAGGAAAAATCTAAATCCCCATGCAGAGTGTTCAAGTCAACTATACTTTCCCTTTTGGATTTATAATCATATTAGAGAAGAAAAAGATATAGAAATGGAAGATGTCACAGAGGAGGAAAATGAAATAGCAAAGAAGATGATCATAGTTGCACTTTGGTGTATACAATTGAAGCCAAATGATCGCCCATCAATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGATAGTTTGGAAATACCTCAAAAGCCTACTCTATATCCAAATGAAACGATGACAAAAGATTGA 1950 0.3908 MRNSSVIMWREKALLVVVLLLVQQICATNKQEHGCPPSSCGKITNIAYPFRLKGDPENCGLDRYELGCENNVTVLYLYSGKYHVQAINYNNFTVRVVDPGVQQPNCSSLPRYFLSRSNFSDTYSDATDPYQAGQNPISNWAWLTFQHIVFLNCSHPVTYNRKYVDTASYINWDSKGYYIYAIAGDLKAEDFEVGCHVKLVAPTSWLGLDTNNYSYTAMHSGLVYGFVISWMHLACKNHCRHRKGYFFRGLYEHGNRYCYFDSSRQKLRCALCNRRRSGIICGILERLQIFVTVVVIVIMSWPCKFLIGVPLFIALLICKWRKRHLSMYESIENYLEQNNMMPIRYSYKEIKKMAGGFKDMLGEGGYGFVFKGKLRSGPCVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVQLIGFCVQGSKRVLVYEFMPNGSLDKFIFSKDGNIHLSYDRIYNISIGIARGIAYLHHGCEMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKVDVYSFGMLLMEMVSKRKNLNPHAECSSQLYFPFWIYNHIREEKDIEMEDVTEEENEIAKKMIIVALWCIQLKPNDRPSMNKVVEMLEGDIDSLEIPQKPTLYPNETMTKD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00605 649 FunFam serine/threonine-protein kinase PBS1-like 324 429 - -
Pumo9g00605 649 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Pumo9g00605 649 Gene3D Transferase(Phosphotransferase) domain 1 430 636 - -
Pumo9g00605 649 Coils Coil 575 595 - -
Pumo9g00605 649 SUPERFAMILY Protein kinase-like (PK-like) 339 626 IPR011009 -
Pumo9g00605 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pumo9g00605 649 Gene3D Phosphorylase Kinase; domain 1 329 429 - -
Pumo9g00605 649 FunFam PR5-like receptor kinase 430 637 - -
Pumo9g00605 649 PANTHER RUST RESISTANCE KINASE LR10-RELATED 328 641 IPR045874 GO:0004672
Pumo9g00605 649 ProSiteProfiles Protein kinase domain profile. 355 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00605 649 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00605 649 CDD STKc_IRAK 361 627 - -
Pumo9g00605 649 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Pumo9g00605 649 Pfam Protein kinase domain 359 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00605 Pumo-Chr9 10333522 10337719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00605 35 647 Receptor kinase-like Gene Family AT1G66910 35.148 1.17e-111 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo9g00605 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00605 - - gmx:100782182 1016.14