Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g00605 | ATGAGAAACAGTTCGGTCATCATGTGGAGAGAGAAAGCGTTATTGGTGGTGGTACTGCTTCTAGTCCAGCAAATTTGTGCTACCAACAAGCAAGAGCATGGTTGCCCTCCTTCTTCCTGTGGCAAAATCACCAACATAGCTTATCCGTTTCGATTAAAAGGCGACCCCGAAAACTGCGGCCTCGACAGGTATGAGCTGGGTTGTGAAAATAATGTTACGGTTTTATATTTGTACTCTGGAAAATATCATGTGCAGGCAATCAACTACAATAACTTCACAGTCCGAGTGGTTGATCCGGGAGTTCAACAACCAAATTGCTCCTCCCTTCCTCGCTATTTCTTGTCTCGCTCCAATTTCAGTGATACTTACAGTGATGCCACAGATCCATACCAAGCCGGTCAAAATCCAATTAGTAATTGGGCCTGGCTCACTTTCCAGCATATAGTGTTTTTGAATTGTAGTCATCCAGTCACTTACAATCGTAAGTATGTGGATACTGCTTCCTACATCAACTGGGACTCCAAAGGCTATTATATATACGCTATTGCTGGTGACTTAAAAGCAGAGGACTTTGAAGTTGGTTGCCACGTAAAGCTGGTTGCTCCCACATCTTGGTTGGGTTTGGACACTAACAATTATTCCTACACTGCAATGCACAGCGGGCTAGTCTATGGATTTGTGATTTCATGGATGCATCTCGCCTGTAAGAATCATTGTCGACATAGAAAAGGATATTTTTTTAGAGGTCTATATGAACATGGAAATAGATACTGCTATTTCGACTCTTCCAGGCAGAAGCTTCGATGCGCACTGTGTAATCGCCGACGTTCGGGCATTATATGTGGAATACTGGAAAGACTGCAAATCTTTGTCACCGTTGTCGTAATTGTCATTATGTCATGGCCATGCAAATTTTTGATTGGGGTGCCACTGTTTATTGCGCTTTTGATATGTAAATGGAGAAAAAGACATTTGTCAATGTATGAAAGTATTGAAAATTATCTAGAACAAAATAACATGATGCCTATCAGATACTCATACAAGGAAATCAAGAAGATGGCAGGAGGTTTTAAAGATATGTTGGGTGAAGGAGGATATGGCTTTGTGTTCAAGGGAAAGTTGCGTAGCGGGCCTTGTGTAGCAATAAAGATGTTAGGTAAATCGAAAGGAAATGGGCAGGATTTCATTAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTAGTACAATTAATTGGATTTTGTGTTCAAGGGTCAAAACGTGTTCTTGTCTATGAATTCATGCCTAATGGATCTCTTGATAAATTTATTTTTTCCAAAGATGGAAATATACATTTAAGCTATGACAGAATATATAATATATCAATTGGAATAGCCCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAGCCCCACAACATCCTACTAGATGAAAACTTCAACCCAAAGGTCTCTGACTTTGGATTGGCAAAGCTATATCCAATAGATAATAGCATTGTCACAATGACAGCAGCAAGAGGGACAATTGGGTATATGGCTCCAGAATTGTTTTATAAAAATATTGGGGGAATATCCCATAAGGTTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGTAAGCAAGAGGAAAAATCTAAATCCCCATGCAGAGTGTTCAAGTCAACTATACTTTCCCTTTTGGATTTATAATCATATTAGAGAAGAAAAAGATATAGAAATGGAAGATGTCACAGAGGAGGAAAATGAAATAGCAAAGAAGATGATCATAGTTGCACTTTGGTGTATACAATTGAAGCCAAATGATCGCCCATCAATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGATAGTTTGGAAATACCTCAAAAGCCTACTCTATATCCAAATGAAACGATGACAAAAGATTGA | 1950 | 0.3908 | MRNSSVIMWREKALLVVVLLLVQQICATNKQEHGCPPSSCGKITNIAYPFRLKGDPENCGLDRYELGCENNVTVLYLYSGKYHVQAINYNNFTVRVVDPGVQQPNCSSLPRYFLSRSNFSDTYSDATDPYQAGQNPISNWAWLTFQHIVFLNCSHPVTYNRKYVDTASYINWDSKGYYIYAIAGDLKAEDFEVGCHVKLVAPTSWLGLDTNNYSYTAMHSGLVYGFVISWMHLACKNHCRHRKGYFFRGLYEHGNRYCYFDSSRQKLRCALCNRRRSGIICGILERLQIFVTVVVIVIMSWPCKFLIGVPLFIALLICKWRKRHLSMYESIENYLEQNNMMPIRYSYKEIKKMAGGFKDMLGEGGYGFVFKGKLRSGPCVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVQLIGFCVQGSKRVLVYEFMPNGSLDKFIFSKDGNIHLSYDRIYNISIGIARGIAYLHHGCEMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKVDVYSFGMLLMEMVSKRKNLNPHAECSSQLYFPFWIYNHIREEKDIEMEDVTEEENEIAKKMIIVALWCIQLKPNDRPSMNKVVEMLEGDIDSLEIPQKPTLYPNETMTKD | 649 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g00605 | 649 | FunFam | serine/threonine-protein kinase PBS1-like | 324 | 429 | - | - | |
Pumo9g00605 | 649 | ProSitePatterns | Protein kinases ATP-binding region signature. | 361 | 383 | IPR017441 | GO:0005524 | |
Pumo9g00605 | 649 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 636 | - | - | |
Pumo9g00605 | 649 | Coils | Coil | 575 | 595 | - | - | |
Pumo9g00605 | 649 | SUPERFAMILY | Protein kinase-like (PK-like) | 339 | 626 | IPR011009 | - | |
Pumo9g00605 | 649 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 475 | 487 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo9g00605 | 649 | Gene3D | Phosphorylase Kinase; domain 1 | 329 | 429 | - | - | |
Pumo9g00605 | 649 | FunFam | PR5-like receptor kinase | 430 | 637 | - | - | |
Pumo9g00605 | 649 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 328 | 641 | IPR045874 | GO:0004672 | |
Pumo9g00605 | 649 | ProSiteProfiles | Protein kinase domain profile. | 355 | 640 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo9g00605 | 649 | SMART | serkin_6 | 355 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo9g00605 | 649 | CDD | STKc_IRAK | 361 | 627 | - | - | |
Pumo9g00605 | 649 | Pfam | Wall-associated receptor kinase galacturonan-binding | 35 | 98 | IPR025287 | GO:0030247 | |
Pumo9g00605 | 649 | Pfam | Protein kinase domain | 359 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g00605 | Pumo-Chr9 | 10333522 | 10337719 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g00605 | 35 | 647 | Receptor kinase-like Gene Family | AT1G66910 | 35.148 | 1.17e-111 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Pumo9g00605 | Pkinase | 4.2e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g00605 | - | - | gmx:100782182 | 1016.14 |