Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00604 ATGTCATGGCCATGCAAATTTTTGTTTGGGGTGCCACTGTTTATTGCGCTTTTGATATGTAAATGGAGAAAAAGACATTTGTCAATGTATGAAAGTATTGAAAATTATCTAGAACAAAATAACTTGATGCCTATCAGATACTCATACAAGGAAATCAAGAAGATGGCAGGAGGTTTTAAAGATAAGTTGGGTGAAGGAGGATATGGCTTTGTGTTCAAGGGAAAGTTGTGTAGCGGGCCTTGTGTAGCAATAAAGATGTTAGGTAAATTGAAAGGAAATGGGCAGGATTTCATTAGTGAAGTTGCAACCATTGGAAGAATACATCACCAAAATGTAGTACAATTAATTGGATTTTGTGTTCAAGGGTCAAAACGTGCTCTTGTCTATGAATTCATGTCCAATGGATCTCTTGATAAATTTATTTTTTCCAATGATGGAAATATACATTTAAGCTATGACAGATTATATAATATATCAGTTGGAGTAGCCCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAGCCCCACAACATCCTACTGGATGAAAACTTCACCCCAAAGGTCTCTGACTTTGGATTGGCAAAGTTGTATCCAATAGATAATAGCATTGTCACAATGACAGCTGCAAGAGGGACAATTGGGTATATGGCTCCAGAATTGTTTTATAAAAATATTGGGGGAATATCCCATAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAGATGGCAAGTAAGAGAAAAAATCTAAATCCCCATGCAGAACGTTCAAGTCAACTTTACTTCCCCTTCTGGATTTATAATCATATTGGAGAAGAGAAATATATAGAAATGAAAGATGTCACAGAGGAGGAAAAGAAAATAGCAAAGAAGATTATCATAATTGCACTTTGGTGTATACAATTGAAACCAAATGATCGTCCCTCAATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGAGAACTTGGAAATACCTCCAAAGCCTACTCTATTTCCAGATGAAACGATGACAGAGGAATAG 1056 0.3636 MSWPCKFLFGVPLFIALLICKWRKRHLSMYESIENYLEQNNLMPIRYSYKEIKKMAGGFKDKLGEGGYGFVFKGKLCSGPCVAIKMLGKLKGNGQDFISEVATIGRIHHQNVVQLIGFCVQGSKRALVYEFMSNGSLDKFIFSNDGNIHLSYDRLYNISVGVARGIAYLHHGCEMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHAERSSQLYFPFWIYNHIGEEKYIEMKDVTEEEKKIAKKIIIIALWCIQLKPNDRPSMNKVVEMLEGDIENLEIPPKPTLFPDETMTEE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00604 351 FunFam PR5-like receptor kinase 132 339 - -
Pumo9g00604 351 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 343 IPR045874 GO:0004672
Pumo9g00604 351 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Pumo9g00604 351 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00604 351 FunFam serine/threonine-protein kinase PBS1-like 26 131 - -
Pumo9g00604 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pumo9g00604 351 SMART serkin_6 57 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00604 351 Pfam Protein kinase domain 60 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00604 351 Gene3D Transferase(Phosphotransferase) domain 1 132 336 - -
Pumo9g00604 351 Gene3D Phosphorylase Kinase; domain 1 31 131 - -
Pumo9g00604 351 SUPERFAMILY Protein kinase-like (PK-like) 42 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00604 Pumo-Chr9 10322374 10323600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00604 2 350 Receptor kinase-like Gene Family AT5G38280 47.222 1.33e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo9g00604 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00604 - - gmx:121173411 635.95